Evidence map›Paper›PMID 35144926›Full record

ArticleAnnals of the rheumatic diseases2022

Proteogenomic analysis of the autoreactive B cell repertoire in blood and tissues of patients with Sjögren's syndrome.

Mathijs G A Broeren, Jing J Wang, Giulia Balzaretti, Patricia J T A Groenen, Barbera D C van Schaik, Tim Chataway, Charlotte Kaffa, Sander Bervoets, Konnie M Hebeda, Gergana Bounova and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Annals of the rheumatic diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. [Single-cell RNA sequencing of B cells reveals molecular typing in Sjögren syndrome].Beijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Mathijs G A Broeren *Department of Rheumatology, Radboudumc, Nijmegen, The Netherlands.
Jing J Wang *Department of Immunology, Flinders University, Adelaide, South Australia, Australia.
Giulia Balzaretti *Department of Clinical Immunology and Rheumatology, Amsterdam Rheumatology and Immunology Center, Amsterdam, The Netherlands.
Patricia J T A GroenenDepartment of Pathology, Radboudumc, Nijmegen, The Netherlands.
Barbera D C van SchaikBioinformatics Laboratory, Department of Epidemiology and Data Science, Amsterdam University Medical Centres, Amsterdam, The Netherlands.
Tim ChatawayCollege of Medicine and Public Health, Flinders University of South Australia, Adelaide, South Australia, Australia.
Charlotte KaffaRadboud Technology Center for Bioinformatics, Radboudumc, Nijmegen, The Netherlands.
Sander BervoetsRadboud Technology Center for Bioinformatics, Radboudumc, Nijmegen, The Netherlands.
Konnie M HebedaDepartment of Pathology, Radboudumc, Nijmegen, The Netherlands.
Gergana BounovaEnpicom BV, 's Hertogenbosch, The Netherlands.
Ger J M PruijnDepartment of Biomolecular Chemistry, Institute for Molecules and Materials, Radboud University, Nijmegen, The Netherlands.
Thomas P GordonSA Pathology, Department of Immunology, College of Medicine and Public Health, Flinders University, Bedford Park, South Australia, Australia.
Niek De VriesDepartment of Clinical Immunology and Rheumatology, Amsterdam Rheumatology and Immunology Center, Amsterdam, The Netherlands.
Rogier M ThurlingsDepartment of Rheumatology, Radboudumc, Nijmegen, The Netherlands rogier.thurlings@radboudumc.nl.ORCID 0000-0003-4054-0290
Flinders University · AURadboud University Medical Center · NLRadboud University Nijmegen · NLENPICOM (Netherlands) · NLRadboud Institute for Molecular Life Sciences · NLUniversity of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo comparatively analyse the aberrant affinity maturation of the antinuclear and rheumatoid factor (RF) B cell repertoires in blood and tissues of patients with Sjögren's syndrome (SjS) using an integrated omics workflow.

methodsPeptide sequencing of anti-Ro60, anti-Ro52, anti-La and RF was combined with B cell repertoire analysis at the DNA, RNA and single cell level in blood B cell subsets, affected salivary gland and extranodal marginal zone lymphomas of mucosa-associated lymphoid tissue (MALT) of patients with SjS.

resultsAffected tissues contained anti-Ro60, anti-Ro52, anti-La and RF clones as a small part of a polyclonal infiltrate. Anti-Ro60, anti-La and anti-Ro52 clones outnumbered RF clones. MALT lymphoma tissues contained monoclonal RF expansions. Autoreactive clones were not selected from a restricted repertoire in a circulating B cell subset. The antinuclear antibody (ANA) repertoires displayed similar antigen-dependent and immunoglobulin (Ig) G1-directed affinity maturation. RF clones displayed antigen-dependent, IgM-directed and more B cell receptor integrity-dependent affinity maturation. This coincided with extensive intra-clonal diversification in RF-derived lymphomas. Regeneration of clinical disease manifestations after rituximab coincided with large RF clones, which not necessarily belonged to the lymphoma clone, that displayed continuous affinity maturation and intra-clonal diversification.

conclusionThe ANA and RF repertoires in patients with SjS display tissue-restricted, antigen-dependent and divergent affinity maturation. Affinity maturation of RF clones deviates further during RF clone derived lymphomagenesis and during regeneration of the autoreactive repertoire after temporary disruption by rituximab. These data give insight into the molecular mechanisms of autoreactive inflammation in SjS, assist MALT lymphoma diagnosis and allow tracking its response to rituximab.

Indexed as

Lymphoma, B-Cell, Marginal ZoneProteogenomicsSjogren's SyndromeB-LymphocytesHumansImmunoglobulin GRheumatoid FactorRituximabImmunoglobulin GRheumatoid FactorRituximabautoantibodiesautoimmunityB-lymphocytesSjogren's syndrome

Identifiers

PMID35144926
PMCPMC8995816
OpenAlexW4211063912

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.