Evidence map›Paper›PMID 35144000›Full record

ArticleJournal of biomedical informatics2022

Search like an expert: Reducing expertise disparity using a hybrid neural index for COVID-19 queries.

Vincent Nguyen, Maciej Rybinski, Sarvnaz Karimi, Zhenchang Xing

Abstract read
In one paragraph

Article in Journal of biomedical informatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Vincent NguyenThe Australian National University, Canberra, Australia; CSIRO Data61, Sydney, NSW, Australia. Electronic address: vincent.nguyen@anu.edu.au.
Maciej RybinskiCSIRO Data61, Sydney, NSW, Australia. Electronic address: maciek.rybinski@csiro.au.
Sarvnaz KarimiCSIRO Data61, Sydney, NSW, Australia. Electronic address: sarvnaz.karimi@csiro.au.
Zhenchang XingThe Australian National University, Canberra, Australia. Electronic address: zhenchang.xing@anu.edu.au.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Consumers from non-medical backgrounds often look for information regarding a specific medical information need; however, they are limited by their lack of medical knowledge and may not be able to find reputable resources. As a case study, we investigate reducing this knowledge barrier to allow consumers to achieve search effectiveness comparable to that of an expert, or a medical professional, for COVID-19 related questions. We introduce and evaluate a hybrid index model that allows a consumer to formulate queries using consumer language to find relevant answers to COVID-19 questions. Our aim is to reduce performance degradation between medical professional queries and those of a consumer. We use a universal sentence embedding model to project consumer queries into the same semantic space as professional queries. We then incorporate sentence embeddings into a search framework alongside an inverted index. Documents from this index are retrieved using a novel scoring function that considers sentence embeddings and BM25 scoring. We find that our framework alleviates the expertise disparity, which we validate using an additional set of crowdsourced-consumer-queries even in an unsupervised setting. We also propose an extension of our method, where the sentence encoder is optimised in a supervised setup. Our framework allows for a consumer to search using consumer queries to match the search performance with that of a professional.

Indexed as

COVID-19Information Storage and RetrievalHumansNatural Language ProcessingSARS-CoV-2Unified Medical Language SystemBiomedical searchCOVID-19Dense retrievalInformation retrievalMedical misinformationNatural language processingNeural indexUniversal sentence embeddings

Identifiers

PMID35144000
PMCPMC9759932

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.