Evidence map›Paper›PMID 35143957›Full record

ArticleJournal of pharmacological and toxicological methods

High-content analysis and Kinetic Image Cytometry identify toxicity and epigenetic effects of HIV antiretrovirals on human iPSC-neurons and primary neural precursor cells.

Alyson S Smith, Soneela Ankam, Chen Farhy, Lorenzo Fiengo, Ranor C B Basa, Kara L Gordon, Charles T Martin, Alexey V Terskikh, Kelly L Jordan-Sciutto, Jeffrey H Price and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of pharmacological and toxicological methods. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Tenofovir disoproxil fumarate mediates neuronal injury by inducing neurotoxicity.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2023
    Article
  7. Article
  8. Article
  9. HIV-1 Integrase Strand Transfer Inhibitors and Neurodevelopment.Pharmaceuticals (Basel, Switzerland) · 2022
    Review
  10. Studying Chromatin Epigenetics with Fluorescence Microscopy.International journal of molecular sciences · 2022
    Review
  11. HIV Latency in Myeloid Cells: Challenges for a Cure.Pathogens (Basel, Switzerland) · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Alyson S SmithVala Sciences, Inc., San Diego, CA, USA. Electronic address: asmith@valasciences.com.
Soneela AnkamVala Sciences, Inc., San Diego, CA, USA.
Chen FarhySanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Lorenzo FiengoSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Ranor C B BasaVala Sciences, Inc., San Diego, CA, USA.
Kara L GordonVala Sciences, Inc., San Diego, CA, USA.
Charles T MartinVala Sciences, Inc., San Diego, CA, USA.
Alexey V TerskikhSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Kelly L Jordan-SciuttoDepartment of Pathology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Department of Basic and Translational Sciences, School of Dental Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Jeffrey H PriceVala Sciences, Inc., San Diego, CA, USA; Scintillon Institute, San Diego, CA, USA.
Patrick M McDonoughVala Sciences, Inc., San Diego, CA, USA.
Vala Sciences (United States) · USDiscovery Institute · USSanford Burnham Prebys Medical Discovery Institute · USScintillon Institute · USUniversity of Pennsylvania · US

Funding

Translational Research Support CoreP30ES013508 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI Trevor M Penning · 2006 to 2026
$35.3M
Assay of environmental toxicants for toxicity related to Alzheimer's Disease utilizing human iPSC-derived- neurons and microgliaR44ES026268 · NIEHS · VALA SCIENCES, INC. · PI MCDONOUGH, PATRICK M · 2018 to 2019
$2.0M
The hCNS-HIV/ARV assay system, a platform utilizing human iPSC-neurons/-microglia/-astrocytes to test HIV/AIDS therapeutics for neurotoxicity related to HIV-associated cognitive disroder (HAND)R44MH119621 · NIMH · VALA SCIENCES, INC. · PI MCDONOUGH, PATRICK M · 2021 to 2022
$1.9M
The Alzheimer's Therapeutics Screening Assay: a high-throughput drug-discovery platform utilizing neurons and microglia derived from human induced pluripotent stem cells and Kinetic Image CytometryR43AG062012 · NIA · VALA SCIENCES, INC. · PI MCDONOUGH, PATRICK M · 2018 to 2018
$301k
The Microscopic Imaging of Epigenetic Landscape- NeuroDevelopment (MIEL-ND) assay: a high throughput platform to screen compounds for neurodevelopmental effectsR41MH119621 · NIMH · VALA SCIENCES, INC. · PI MCDONOUGH, PATRICK M · 2018 to 2018
$300k
NIA NIH HHS R43 AG062012NIEHS NIH HHS P30 ES013508NIEHS NIH HHS R44 ES026268NIMH NIH HHS R41 MH119621NIMH NIH HHS R44 MH119621
6 · The paper itself

Abstract

introductionDespite viral suppression due to combination antiretroviral therapy (cART), HIV-associated neurocognitive disorders (HAND) continue to affect half of people with HIV, suggesting that certain antiretrovirals (ARVs) may contribute to HAND.

methodsWe examined the effects of nucleoside/nucleotide reverse transcriptase inhibitors tenofovir disoproxil fumarate (TDF) and emtricitabine (FTC) and the integrase inhibitors dolutegravir (DTG) and elvitegravir (EVG) on viability, structure, and function of glutamatergic neurons (a subtype of CNS neuron involved in cognition) derived from human induced pluripotent stem cells (hiPSC-neurons), and primary human neural precursor cells (hNPCs), which are responsible for neurogenesis.

resultsUsing automated digital microscopy and image analysis (high content analysis, HCA), we found that DTG, EVG, and TDF decreased hiPSC-neuron viability, neurites, and synapses after 7 days of treatment. Analysis of hiPSC-neuron calcium activity using Kinetic Image Cytometry (KIC) demonstrated that DTG and EVG also decreased the frequency and magnitude of intracellular calcium transients. Longer ARV exposures and simultaneous exposure to multiple ARVs increased the magnitude of these neurotoxic effects. Using the Microscopic Imaging of Epigenetic Landscapes (MIEL) assay, we found that TDF decreased hNPC viability and changed the distribution of histone modifications that regulate chromatin packing, suggesting that TDF may reduce neuroprogenitor pools important for CNS development and maintenance of cognition in adults.

conclusionThis study establishes human preclinical assays that can screen potential ARVs for CNS toxicity to develop safer cART regimens and HAND therapeutics.

Indexed as

HIV InfectionsInduced Pluripotent Stem CellsNeural Stem CellsAdultEpigenesis, GeneticHumansImage CytometryNeuronsCalcium transientsEpigenetic regulationHigh content analysisHIV antiretroviralsHIV-associated neurocognitive disorderHuman induced pluripotent stem cell-derived glutamatergic neuronsHuman neural precursor cellsKinetic image cytometryNeuritesSynapses

Identifiers

PMID35143957
PMCPMC9103414
OpenAlexW4210863251

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.