Evidence map›Paper›PMID 35143653›Full record

ArticleGenetics2022

ccd-5, a novel cdk-5 binding partner, regulates pioneer axon guidance in the ventral nerve cord of Caenorhabditis elegans.

Abigail H Feresten, Jaffar M Bhat, Alex J Yu, Richard Zapf, Hamida Safi, Vinci Au, Stephane Flibotte, Claudia Doell, Donald G Moerman, Nancy Hawkins and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Abigail H FerestenDepartment of Biological Sciences, Centre for Cell Biology, Development, and Disease, Simon Fraser University, Burnaby, BC V5A1S6, Canada.ORCID 0000-0003-4376-3350
Jaffar M BhatDepartment of Biological Sciences, Centre for Cell Biology, Development, and Disease, Simon Fraser University, Burnaby, BC V5A1S6, Canada.ORCID 0000-0003-1584-9309
Alex J YuDjavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC V6T2B5, Canada.ORCID 0000-0002-3994-8232
Richard ZapfDepartment of Biological Sciences, Centre for Cell Biology, Development, and Disease, Simon Fraser University, Burnaby, BC V5A1S6, Canada.ORCID 0000-0002-2178-8808
Hamida SafiDepartment of Molecular Biology and Biochemistry, Centre for Cell Biology, Development, and Disease, Simon Fraser University, Burnaby, BC V5A1S6, Canada.ORCID 0000-0001-9566-7534
Vinci AuDepartment of Zoology, University of British Columbia, Vancouver, BC V6T1Z4, Canada.
Stephane FlibotteUBC/LSI Bioinformatics Facility, University of British Columbia, Vancouver, BC V6T1Z4, Canada.ORCID 0000-0001-9613-7666
Claudia DoellDepartment of Zoology, University of British Columbia, Vancouver, BC V6T1Z4, Canada.ORCID 0000-0003-1783-416X
Donald G MoermanDepartment of Zoology, University of British Columbia, Vancouver, BC V6T1Z4, Canada.
Nancy HawkinsDepartment of Molecular Biology and Biochemistry, Centre for Cell Biology, Development, and Disease, Simon Fraser University, Burnaby, BC V5A1S6, Canada.ORCID 0000-0003-0141-6780
Catharine H RankinDjavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, V6T2B5, Canada.ORCID 0000-0002-1781-0654
Harald HutterDepartment of Biological Sciences, Centre for Cell Biology, Development, and Disease, Simon Fraser University, Burnaby, BC V5A1S6, Canada.ORCID 0000-0002-1162-4199
Simon Fraser University · CAUniversity of British Columbia · CA

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
NIH HHS P40 OD010440
6 · The paper itself

Abstract

During nervous system development, axons navigate complex environments to reach synaptic targets. Early extending axons must interact with guidance cues in the surrounding tissue, while later extending axons can interact directly with earlier "pioneering" axons, "following" their path. In Caenorhabditis elegans, the AVG neuron pioneers the right axon tract of the ventral nerve cord. We previously found that aex-3, a rab-3 guanine nucleotide exchange factor, is essential for AVG axon navigation in a nid-1 mutant background and that aex-3 might be involved in trafficking of UNC-5, a receptor for the guidance cue UNC-6/netrin. Here, we describe a new gene in this pathway: ccd-5, a putative cdk-5 binding partner. ccd-5 mutants exhibit increased navigation defects of AVG pioneer as well as interneuron and motor neuron follower axons in a nid-1 mutant background. We show that ccd-5 acts in a pathway with cdk-5, aex-3, and unc-5. Navigation defects of follower interneuron and motoneuron axons correlate with AVG pioneer axon defects. This suggests that ccd-5 mostly affects pioneer axon navigation and that follower axon defects are largely a secondary consequence of pioneer navigation defects. To determine the consequences for nervous system function, we assessed various behavioral and movement parameters. ccd-5 single mutants have no significant movement defects, and nid-1 ccd-5 double mutants are less responsive to mechanosensory stimuli compared with nid-1 single mutants. These surprisingly minor defects indicate either a high tolerance for axon guidance defects within the motor circuit and/or an ability to maintain synaptic connections among commonly misguided axons.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsAxon GuidanceAxonsNetrinsNeuronsReceptors, Cell SurfaceCaenorhabditis elegans ProteinsNetrinsReceptors, Cell SurfaceUNC-5 protein, C elegansaxon guidanceaxon navigationcdk5growth conenervous system developmentpioneertrafficking

Identifiers

PMID35143653
PMCPMC8982044
OpenAlexW4211116792

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.