Evidence map›Paper›PMID 35143593›Full record

ArticlePLoS pathogens2022

Enteric nervous system modulation of luminal pH modifies the microbial environment to promote intestinal health.

M Kristina Hamilton, Elena S Wall, Catherine D Robinson, Karen Guillemin, Judith S Eisen

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Developmental regulation of intestinalbioRxiv : the preprint server for biology · 2025
    Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. ThemBio · 2025
    Article
  10. Review
  11. The enteric nervous system.Physiological reviews · 2023
    Review
  12. Who's talking to whom: microbiome-enteric nervous system interactions in early life.American journal of physiology. Gastrointestinal and liver physiology · 2023
    Review
  13. Article
  14. Review
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

M Kristina HamiltonInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0003-0293-7043
Elena S WallInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0001-5120-0801
Catherine D RobinsonInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, United States of America.
Karen GuilleminInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0001-6004-9955
Judith S EisenInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.
University of Oregon · USCanadian Institute for Advanced Research · CA

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
Research Area IIIP50GM098911 · NIGMS · UNIVERSITY OF OREGON · PI CONERY, JOHN · 2012 to 2016
$9.8M
Live Imaging CoreP01GM125576 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 2018 to 2022
$7.8M
NICHD NIH HHS P01 HD022486NIGMS NIH HHS P01 GM125576NIGMS NIH HHS P50 GM098911
6 · The paper itself

Abstract

The enteric nervous system (ENS) controls many aspects of intestinal homeostasis, including parameters that shape the habitat of microbial residents. Previously we showed that zebrafish lacking an ENS, due to deficiency of the sox10 gene, develop intestinal inflammation and bacterial dysbiosis, with an expansion of proinflammatory Vibrio strains. To understand the primary defects resulting in dysbiosis in sox10 mutants, we investigated how the ENS shapes the intestinal environment in the absence of microbiota and associated inflammatory responses. We found that intestinal transit, intestinal permeability, and luminal pH regulation are all aberrant in sox10 mutants, independent of microbially induced inflammation. Treatment with the proton pump inhibitor, omeprazole, corrected the more acidic luminal pH of sox10 mutants to wild type levels. Omeprazole treatment also prevented overabundance of Vibrio and ameliorated inflammation in sox10 mutant intestines. Treatment with the carbonic anhydrase inhibitor, acetazolamide, caused wild type luminal pH to become more acidic, and increased both Vibrio abundance and intestinal inflammation. We conclude that a primary function of the ENS is to regulate luminal pH, which plays a critical role in shaping the resident microbial community and regulating intestinal inflammation.

Indexed as

AnimalsDysbiosisEnteric Nervous SystemGastrointestinal MicrobiomeHomeostasisHydrogen-Ion ConcentrationInflammationIntestinesMutationPhenobarbitalSOXE Transcription FactorsZebrafishZebrafish ProteinsPhenobarbitalsox10 protein, zebrafishSOXE Transcription FactorsZebrafish Proteins

Identifiers

PMID35143593
PMCPMC8830661
OpenAlexW4221038663

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.