Evidence map›Paper›PMID 35141190›Full record

ReviewFrontiers in public health

Uncoupling Molecular Testing for SARS-CoV-2 From International Supply Chains.

Jo-Ann L Stanton, Rory O'Brien, Richard J Hall, Anastasia Chernyavtseva, Hye Jeong Ha, Lauren Jelley, Peter D Mace, Alexander Klenov, Jackson M Treece, John D Fraser and 20 more

Abstract readReview
In one paragraph

Review in Frontiers in public health. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. MAPseq2: a sensitive barcoded connectomics method.bioRxiv : the preprint server for biology · 2026
    Article
  2. Review
  3. Improved protocol forExperimental biology and medicine (Maywood, N.J.) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Jo-Ann L StantonDepartment of Anatomy, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Rory O'BrienDepartment of Anatomy, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Richard J HallAnimal Health Laboratory, Ministry for Primary Industries-Manatu Ahu Matua, Upper Hutt, New Zealand.
Anastasia ChernyavtsevaAnimal Health Laboratory, Ministry for Primary Industries-Manatu Ahu Matua, Upper Hutt, New Zealand.
Hye Jeong HaAnimal Health Laboratory, Ministry for Primary Industries-Manatu Ahu Matua, Upper Hutt, New Zealand.
Lauren JelleyClinical Virology, Institute of Environmental Science and Research Limited (ESR), Upper Hutt, New Zealand.
Peter D MaceDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Alexander KlenovHudak Lab, Department of Biology, York University, Toronto, ON, Canada.
Jackson M TreeceDepartment of Anatomy, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
John D FraserDepartment of Molecular Medicine and Pathology, Faculty of Medical and Health Sciences, University of Auckland, Auckland, New Zealand.
Fiona ClowDepartment of Molecular Medicine and Pathology, Faculty of Medical and Health Sciences, University of Auckland, Auckland, New Zealand.
Lewis ClarkeDepartment of Molecular Medicine and Pathology, Faculty of Medical and Health Sciences, University of Auckland, Auckland, New Zealand.
Yongdong SuSchool of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
Harikrishnan M KurupSchool of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
Vyacheslav V FilichevSchool of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
William RollestonSouth Pacific Sera, Timaru, New Zealand.
Lee LawSouth Pacific Sera, Timaru, New Zealand.
Phillip M RendleFerrier Research Institute, Victoria University of Wellington, Lower Hutt, New Zealand.
Lawrence D HarrisFerrier Research Institute, Victoria University of Wellington, Lower Hutt, New Zealand.
James M WoodFerrier Research Institute, Victoria University of Wellington, Lower Hutt, New Zealand.
Thomas W ScullyFerrier Research Institute, Victoria University of Wellington, Lower Hutt, New Zealand.
James E UssherDepartment of Microbiology and Immunology, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Jenny GrantMolecular Pathology, Southern Community Laboratories, Dunedin, New Zealand.
Timothy A HoreDepartment of Anatomy, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Tim V MoserDepartment of Anatomy, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Rhodri HarfootDepartment of Microbiology and Immunology, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Blair LawleyDepartment of Microbiology and Immunology, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Miguel E Quiñones-MateuDepartment of Microbiology and Immunology, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Patrick CollinsMicroGEM NZ Ltd., Dunedin, New Zealand.
Richard BlaikieResearch and Enterprise, University of Otago, Dunedin, New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rapid global rise of COVID-19 from late 2019 caught major manufacturers of RT-qPCR reagents by surprise and threw into sharp focus the heavy reliance of molecular diagnostic providers on a handful of reagent suppliers. In addition, lockdown and transport bans, necessarily imposed to contain disease spread, put pressure on global supply lines with freight volumes severely restricted. These issues were acutely felt in New Zealand, an island nation located at the end of most supply lines. This led New Zealand scientists to pose the hypothetical question: in a doomsday scenario where access to COVID-19 RT-qPCR reagents became unavailable, would New Zealand possess the expertise and infrastructure to make its own reagents onshore? In this work we describe a review of New Zealand's COVID-19 test requirements, bring together local experts and resources to make all reagents for the RT-qPCR process, and create a COVID-19 diagnostic assay referred to as HomeBrew (HB) RT-qPCR from onshore synthesized components. This one-step RT-qPCR assay was evaluated using clinical samples and shown to be comparable to a commercial COVID-19 assay. Through this work we show New Zealand has both the expertise and, with sufficient lead time and forward planning, infrastructure capacity to meet reagent supply challenges if they were ever to emerge.

Indexed as

COVID-19 Nucleic Acid TestingCOVID-19HumansIndicators and ReagentsSARS-CoV-2Indicators and ReagentsCOVID-19HomeBrewmolecular reagentsRT-qPCRsupply chain

Identifiers

PMID35141190
PMCPMC8818800

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.