Evidence map›Paper›PMID 35140806›Full record

ArticleComputational and mathematical methods in medicine2022

Interpretable Model Based on Pyramid Scene Parsing Features for Brain Tumor MRI Image Segmentation.

Mingyang Zhao, Junchang Xin, Zhongyang Wang, Xinlei Wang, Zhiqiong Wang

Abstract read
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Article in Computational and mathematical methods in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Mingyang ZhaoCollege of Medicine and Biological Information Engineering, Northeastern University, Shenyang 110169, China.ORCID https://orcid.org/0000-0001-6529-0377
Junchang XinSchool of Computer Science and Engineering, Northeastern University, Shenyang 110169, China.ORCID https://orcid.org/0000-0003-2077-8269
Zhongyang WangCollege of Medicine and Biological Information Engineering, Northeastern University, Shenyang 110169, China.ORCID https://orcid.org/0000-0002-9956-795X
Xinlei WangSchool of Computer Science and Engineering, Northeastern University, Shenyang 110169, China.ORCID https://orcid.org/0000-0002-2065-1105
Zhiqiong WangCollege of Medicine and Biological Information Engineering, Northeastern University, Shenyang 110169, China.ORCID https://orcid.org/0000-0003-1430-0795

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to the black box model nature of convolutional neural networks, computer-aided diagnosis methods based on depth learning are usually poorly interpretable. Therefore, the diagnosis results obtained by these unexplained methods are difficult to gain the trust of patients and doctors, which limits their application in the medical field. To solve this problem, an interpretable depth learning image segmentation framework is proposed in this paper for processing brain tumor magnetic resonance images. A gradient-based class activation mapping method is introduced into the segmentation model based on pyramid structure to visually explain it. The pyramid structure constructs global context information with features after multiple pooling layers to improve image segmentation performance. Therefore, class activation mapping is used to visualize the features concerned by each layer of pyramid structure and realize the interpretation of PSPNet. After training and testing the model on the public dataset BraTS2018, several sets of visualization results were obtained. By analyzing these visualization results, the effectiveness of pyramid structure in brain tumor segmentation task is proved, and some improvements are made to the structure of pyramid model based on the shortcomings of the model shown in the visualization results. In summary, the interpretable brain tumor image segmentation method proposed in this paper can well explain the role of pyramid structure in brain tumor image segmentation, which provides a certain idea for the application of interpretable method in brain tumor segmentation and has certain practical value for the evaluation and optimization of brain tumor segmentation model.

Indexed as

Neural Networks, ComputerAlgorithmsBrain NeoplasmsComputational BiologyDatabases, FactualDiagnosis, Computer-AssistedHumansMagnetic Resonance ImagingNeuroimaging

Identifiers

PMID35140806
PMCPMC8820931

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.