Evidence map›Paper›PMID 35139898›Full record

ArticleCell & bioscience2022

Pseudomonas aeruginosa modulates alginate biosynthesis and type VI secretion system in two critically ill COVID-19 patients.

Jiuxin Qu, Zhao Cai, Xiangke Duan, Han Zhang, Hang Cheng, Shuhong Han, Kaiwei Yu, Zhaofang Jiang, Yingdan Zhang, Yang Liu and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cell & bioscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Jiuxin Qu *Department of Clinical Laboratory, Shenzhen Third People's Hospital, Second Hospital Affiliated to Southern University of Science and Technology, Guangdong Provincial Clinical Research Center for Infectious Diseases (Tuberculosis), National Clinical Research Center for Infectious Diseases, Shenzhen, 518000, Guangdong, China.
Zhao Cai *School of Medicine, Southern University of Science and Technology, Shenzhen, 518055, China.
Xiangke DuanSchool of Medicine, Southern University of Science and Technology, Shenzhen, 518055, China.
Han ZhangSchool of Medicine, Southern University of Science and Technology, Shenzhen, 518055, China.
Hang ChengSchool of Medicine, Southern University of Science and Technology, Shenzhen, 518055, China.
Shuhong HanSchool of Medicine, Southern University of Science and Technology, Shenzhen, 518055, China.
Kaiwei YuSchool of Medicine, Southern University of Science and Technology, Shenzhen, 518055, China.
Zhaofang JiangDepartment of Clinical Laboratory, Shenzhen Third People's Hospital, Second Hospital Affiliated to Southern University of Science and Technology, Guangdong Provincial Clinical Research Center for Infectious Diseases (Tuberculosis), National Clinical Research Center for Infectious Diseases, Shenzhen, 518000, Guangdong, China.
Yingdan ZhangSchool of Medicine, Southern University of Science and Technology, Shenzhen, 518055, China.
Yang LiuMedical Research Center, Southern University of Science and Technology Hospital, Shenzhen, 518055, China.
Fang BaiSchool of Biological Sciences, Nankai University, Tianjin, 300071, China.
Yingxia LiuDepartment of Clinical Laboratory, Shenzhen Third People's Hospital, Second Hospital Affiliated to Southern University of Science and Technology, Guangdong Provincial Clinical Research Center for Infectious Diseases (Tuberculosis), National Clinical Research Center for Infectious Diseases, Shenzhen, 518000, Guangdong, China.
Lei Liu *Department of Clinical Laboratory, Shenzhen Third People's Hospital, Second Hospital Affiliated to Southern University of Science and Technology, Guangdong Provincial Clinical Research Center for Infectious Diseases (Tuberculosis), National Clinical Research Center for Infectious Diseases, Shenzhen, 518000, Guangdong, China. Liulei3322@aliyun.com.
Liang Yang *Department of Clinical Laboratory, Shenzhen Third People's Hospital, Second Hospital Affiliated to Southern University of Science and Technology, Guangdong Provincial Clinical Research Center for Infectious Diseases (Tuberculosis), National Clinical Research Center for Infectious Diseases, Shenzhen, 518000, Guangdong, China. yangl@sustech.edu.cn.ORCID http://orcid.org/0000-0002-2362-0128
Southern University of Science and Technology · CNNankai University · CN

Funding

Guangdong Basic and Applied Basic Research Foundation 2020A1515010586Guangdong Natural Science Foundation for Distinguished Young Scholar 2020B1515020003Guangdong Province Science and Technology Project 2020B1111170014Science and Technology Program of Shenzhen JCYJ20190809144005609Shenzhen Innovation Committee of Science and Technology ZDSYS20200811144002008Shenzhen Science and Technology Program KQTD20200909113758004
6 · The paper itself

Abstract

backgroundCOVID-19 pneumonia has caused huge impact on the health of infected patients and associated with high morbidity and mortality. Shift in the lung microbial ecology upon such viral infection often worsens the disease and increases host susceptibility to superinfections. Bacterial superinfection contributes to the aggravation of COVID-19 and poses a great challenge to clinical treatments. An in-depth investigation on superinfecting bacteria in COVID-19 patients might facilitate understanding of lung microenvironment post virus infections and superinfection mechanism.

resultsWe analyzed the adaptation of two pairs of P. aeruginosa strains with the same MLST type isolated from two critical COVID-19 patients by combining sequencing analysis and phenotypic assays. Both P. aeruginosa strains were found to turn on alginate biosynthesis and attenuate type VI secretion system (T6SS) during short-term colonization in the COVID-19 patients, which results in excessive biofilm formation and virulence reduction-two distinct markers for chronic infections. The macrophage cytotoxicity test and intracellular reactive oxygen species measurement confirmed that the adapted P. aeruginosa strains reduced their virulence towards host cells and are better to escape from host immune clearance than their ancestors.

conclusionOur study suggests that SARS-CoV-2 infection can create a lung environment that allow rapid adaptive evolution of bacterial pathogens with genetic traits suitable for chronic infections.

Indexed as

Bacterial superinfectionBiofilmCOVID-19Pseudomonas aeruginosaType VI Secretion System

Identifiers

PMID35139898
PMCPMC8827185
OpenAlexW4210875293

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.