Evidence map›Paper›PMID 35138862›Full record

ArticleThe journal of physical chemistry. A2022

Complexation of Green and Red Kaede Fluorescent Protein Chromophores by a Zwitterion to Probe Electrostatic and Induction Field Effects.

Eleanor K Ashworth, Mark H Stockett, Christina Kjær, Philip C Bulman Page, Stephen R Meech, Steen Brøndsted Nielsen, James N Bull

Abstract read
In one paragraph

Article in The journal of physical chemistry. A, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Eleanor K AshworthSchool of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom.ORCID https://orcid.org/0000-0003-4805-4860
Mark H StockettDepartment of Physics, Stockholm University, SE-10691 Stockholm, Sweden.ORCID https://orcid.org/0000-0003-4603-5172
Christina KjærDepartment of Physics and Astronomy, Aarhus University, Aarhus 8000, Denmark.
Philip C Bulman PageSchool of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom.ORCID https://orcid.org/0000-0001-8314-1877
Stephen R MeechSchool of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom.ORCID https://orcid.org/0000-0001-5561-2782
Steen Brøndsted NielsenDepartment of Physics and Astronomy, Aarhus University, Aarhus 8000, Denmark.ORCID https://orcid.org/0000-0001-9800-4744
James N BullSchool of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom.ORCID https://orcid.org/0000-0003-0953-1716

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The photophysics of green fluorescent protein (GFP) and red Kaede fluorescent protein (rKFP) are defined by the intrinsic properties of the light-absorbing chromophore and its interaction with the protein binding pocket. This work deploys photodissociation action spectroscopy to probe the absorption profiles for a series of synthetic GFP and rKFP chromophores as the bare anions and as complexes with the betaine zwitterion, which is assumed as a model for dipole microsolvation. Electronic structure calculations and energy decomposition analysis using Symmetry-Adapted Perturbation Theory are used to characterize gas-phase structures and complex cohesion forces. The calculations reveal a preponderance for coordination of betaine to the phenoxide deprotonation site predominantly through electrostatic forces. Calculations using the STEOM-DLPNO-CCSD method are able to reproduce absolute and relative vertical excitation energies for the bare anions and anion-betaine complexes. On the other hand, treatment of the betaine molecule with a point-charge model, in which the charges are computed from some common electron density population analysis schemes, show that just electrostatic and point-charge induction interactions are unable to account for the betaine-induced spectral shift. The present methodology could be applied to investigate cluster forces and optical properties in other gas-phase ion-zwitterion complexes.

Indexed as

Static ElectricityAnionsGreen Fluorescent ProteinsSpectrum AnalysisAnionsGreen Fluorescent Proteins

Identifiers

PMID35138862
PMCPMC9628818

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.