Evidence map›Paper›PMID 35138422›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2022

Identification and validation of quantitative trait loci for the functional stay green trait in common wheat (Triticum aestivum L.) via high-density SNP-based genotyping.

Tianheng Ren, Tao Fan, Shulin Chen, Yongyan Chen, Xia Ou, Qing Jiang, Wanhua Peng, Zhenglong Ren, Feiquan Tan, Peigao Luo and 1 more

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 18 citations in OpenAlex.

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  5. BrCYP71 mutation resulted in stay-green in pak choi (Brassica rapa L. ssp. chinensis).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  8. A major QTL simultaneously increases the number of spikelets per spike and thousand-kernel weight in a wheat line.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
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  12. Elucidating the Genetic Relationships on the Original Old SicilianInternational journal of molecular sciences · 2022
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  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Tianheng Ren *Provincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China. renth@sicau.edu.cn.ORCID http://orcid.org/0000-0002-4962-9032
Tao Fan *Provincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Shulin ChenProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Yongyan ChenProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Xia OuProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Qing JiangProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Wanhua PengProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Zhenglong RenProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Feiquan TanProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Peigao LuoProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China.
Zhi LiProvincial Key Laboratory for Plant Genetics and Breeding, College of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, China. lizhi@sicau.edu.cn.
Sichuan Agricultural University · CN

Funding

Applied Basic Research Program of Sichuan Province 2019YJ0510Applied Basic Research Program of Sichuan Province 2021YJ0509Department of Science and Technology of Sichuan Province 2021JDRC0127National Natural Science Foundation of China 31801357
6 · The paper itself

Abstract

key messageThis study identified QTLs associated with the functional stay green trait by a high-density genetic map. Two large effect QTLs, QSg.sau-2B.1 and QSg.sau-6A.2, were identified in multiple years and one of them was successfully validated. The functional stay green phenotype enables wheat to acclimate to stressful environments and prolongs the effectiveness of photosynthesis during the end-of-crop season. Despite the fact that stay green mutants in wheat have been reported, our knowledge of loci for the functional stay green trait remains limited. In this study, an RIL population containing 371 lines genotyped using the Wheat55K SNP array was used to map QTLs controlling the functional stay green trait in multiple years. In total, 21 and 19 QTLs were mapped using the BIP or MET modules of the ICIM method, respectively. Among them, two QTLs, QSg.sau-2B.1 and QSg.sau-6A.2, were considered large effect QTLs for the stay green trait and explained 11.43% and 15.27% of phenotypic variation on average, respectively. Two KASP markers were developed and tightly linked to QSg.sau-2B.1 and QSg.sau-6A.2, respectively, and the genetic effects of different genotypes in the RIL population were successfully confirmed. QSg.sau-2B.1 was also validated by linked KASP marker in different genetic backgrounds. QSg.sau-2B.1 and QSg.sau-6A.2 may influence heredity of the stay green trait and also exhibited a positive effect on the grain filling content. In the interval where QSg.sau-2B.1 and QSg.sau-6A.2 were located on the Chinese Spring and T. turgidum ssp. dicoccoides reference genomes, several genes associated with the leaf senescence process were identified. Altogether, our results identified two QTLs associated with the functional stay green trait and will be useful for the fine mapping and cloning of genes for stay green in the future.

Indexed as

Quantitative Trait LociTriticumChromosome MappingGenotypePhenotype

Identifiers

PMID35138422
OpenAlexW4210884746

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.