Evidence map›Paper›PMID 35137078›Full record

ArticleGlycobiology2022

A dominant negative splice variant of the heparan sulfate biosynthesis enzyme NDST1 reduces heparan sulfate sulfation.

Parisa Missaghian, Tabea Dierker, Elham Khosrowabadi, Fredrik Axling, Inger Eriksson, Abdurrahman Ghanem, Marion Kusche-Gullberg, Sakari Kellokumpu, Lena Kjellén

Open access · hybridAbstract read
In one paragraph

Article in Glycobiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Parisa MissaghianDepartment of Medical Biochemistry and Microbiology, The Biomedical Center, Box 582, SE-75123 Uppsala, Sweden.
Tabea DierkerDepartment of Medical Biochemistry and Microbiology, The Biomedical Center, Box 582, SE-75123 Uppsala, Sweden.ORCID 0000-0003-1991-2723
Elham KhosrowabadiFaculty of Biochemistry and Molecular Medicine, Aapistie 7A, 90220 Oulu, Finland.ORCID 0000-0003-1088-6864
Fredrik AxlingDepartment of Surgical Sciences, Uppsala University Hospital, SE-751 85 Uppsala, Sweden.ORCID 0000-0003-3748-3176
Inger ErikssonDepartment of Medical Biochemistry and Microbiology, The Biomedical Center, Box 582, SE-75123 Uppsala, Sweden.
Abdurrahman GhanemDepartment of Medical Biochemistry and Microbiology, The Biomedical Center, Box 582, SE-75123 Uppsala, Sweden.ORCID 0000-0002-4388-6222
Marion Kusche-GullbergDepartment of Biomedicine, University of Bergen, N-5009 Bergen, Norway.ORCID 0000-0002-5636-1695
Sakari KellokumpuFaculty of Biochemistry and Molecular Medicine, Aapistie 7A, 90220 Oulu, Finland.ORCID 0000-0002-2154-4299
Lena KjellénDepartment of Medical Biochemistry and Microbiology, The Biomedical Center, Box 582, SE-75123 Uppsala, Sweden.ORCID 0000-0003-3973-918X
Uppsala University · SEUniversity of Oulu · FIUniversity of Bergen · NOUppsala University Hospital · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NDST1 (glucosaminyl N-deacetylase/N-sulfotransferase) is a key enzyme in heparan sulfate (HS) biosynthesis, where it is responsible for HS N-deacetylation and N-sulfation. In addition to the full length human enzyme of 882 amino acids, here designated NDST1A, a shorter form containing 825 amino acids (NDST1B) is synthesized after alternative splicing of the NDST1 mRNA. NDST1B is mostly expressed at a low level, but increased amounts are seen in several types of cancer where it is associated with shorter survival. In this study, we aimed at characterizing the enzymatic properties of NDST1B and its effect on HS biosynthesis. Purified recombinant NDST1B lacked both N-deacetylase and N-sulfotransferase activities. Interestingly, HEK293 cells overexpressing NDST1B synthesized HS with reduced sulfation and altered domain structure. Fluorescence resonance energy transfer-microscopy demonstrated that both NDST1A and NDST1B had the capacity to interact with the HS copolymerase subunits EXT1 and EXT2 and also to form NDST1A/NDST1B dimers. Since lysates from cells overexpressing NDST1B contained less NDST enzyme activity than control cells, we suggest that NDST1B works in a dominant negative manner, tentatively by replacing the active endogenous NDST1 in the enzyme complexes taking part in biosynthesis.

Indexed as

Heparan SulfateSulfotransferasesAmino AcidsHEK293 CellsHumansMutationAmino AcidsHeparan SulfateSulfotransferasesalternative splicinggolgi enzymeheparan sulfate biosynthesisNDST

Identifiers

PMID35137078
PMCPMC9132247
OpenAlexW4210689950

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.