Evidence map›Paper›PMID 35136673›Full record

ArticleJournal of pathology informatics2022

On the Acceptance of "Fake" Histopathology: A Study on Frozen Sections Optimized with Deep Learning.

Mario Siller, Lea Maria Stangassinger, Christina Kreutzer, Peter Boor, Roman D Bulow, Theo J F Kraus, Saskia von Stillfried, Soraya Wolfl, Sebastien Couillard-Despres, Gertie Janneke Oostingh and 2 more

Abstract read
In one paragraph

Article in Journal of pathology informatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Mario SillerDepartment of Information Technology and System Management, Salzburg University of Applied Sciences, Salzburg, Austria.
Lea Maria StangassingerDepartment of Biomedical Sciences, Salzburg University of Applied Sciences, Salzburg, Austria.
Christina KreutzerInstitute of Experimental Neuroregeneration, Spinal Cord Injury and Tissue Regeneration Center Salzburg, Paracelsus Medical University, Salzburg, Austria.
Peter BoorInstitute of Pathology, RWTH Aachen University Hospital, Aachen, Germany.
Roman D BulowInstitute of Pathology, RWTH Aachen University Hospital, Aachen, Germany.
Theo J F KrausInstitute of Pathology, University Hospital Salzburg, Paracelsus Medical University, Salzburg, Austria.
Saskia von StillfriedInstitute of Pathology, RWTH Aachen University Hospital, Aachen, Germany.
Soraya WolflPatholab Salzburg, Salzburg, Austria.
Sebastien Couillard-DespresInstitute of Experimental Neuroregeneration, Spinal Cord Injury and Tissue Regeneration Center Salzburg, Paracelsus Medical University, Salzburg, Austria.
Gertie Janneke OostinghDepartment of Biomedical Sciences, Salzburg University of Applied Sciences, Salzburg, Austria.
Anton HittmairDepartment of Pathology and Microbiology, Kardinal Schwarzenberg Klinikum, Schwarzach, Austria.
Michael GadermayrDepartment of Information Technology and System Management, Salzburg University of Applied Sciences, Salzburg, Austria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe fast acquisition process of frozen sections allows surgeons to wait for histological findings during the interventions to base intrasurgical decisions on the outcome of the histology. Compared with paraffin sections, however, the quality of frozen sections is often strongly reduced, leading to a lower diagnostic accuracy. Deep neural networks are capable of modifying specific characteristics of digital histological images. Particularly, generative adversarial networks proved to be effective tools to learn about translation between two modalities, based on two unconnected data sets only. The positive effects of such deep learning-based image optimization on computer-aided diagnosis have already been shown. However, since fully automated diagnosis is controversial, the application of enhanced images for visual clinical assessment is currently probably of even higher relevance.

methodsThree different deep learning-based generative adversarial networks were investigated. The methods were used to translate frozen sections into virtual paraffin sections. Overall, 40 frozen sections were processed. For training, 40 further paraffin sections were available. We investigated how pathologists assess the quality of the different image translation approaches and whether experts are able to distinguish between virtual and real digital pathology.

resultsPathologists' detection accuracy of virtual paraffin sections (from pairs consisting of a frozen and a paraffin section) was between 0.62 and 0.97. Overall, in 59% of images, the virtual section was assessed as more appropriate for a diagnosis. In 53% of images, the deep learning approach was preferred to conventional stain normalization (SN).

conclusionOverall, expert assessment indicated slightly improved visual properties of converted images and a high similarity to real paraffin sections. The observed high variability showed clear differences in personal preferences.

Indexed as

Frozen sectionsgenerative adversarial networkshistologyparaffin sectionsthyroid cancerwhole slide imaging

Identifiers

PMID35136673
PMCPMC8794030

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.