Evidence map›Paper›PMID 35135578›Full record

ArticleJournal of neuroinflammation2022

Posttranslational modifications of proteins are key features in the identification of CSF biomarkers of multiple sclerosis.

Ivan L Salazar, Ana S T Lourenço, Bruno Manadas, Inês Baldeiras, Cláudia Ferreira, Anabela Claro Teixeira, Vera M Mendes, Ana Margarida Novo, Rita Machado, Sónia Batista and 6 more

Open access · goldAbstract read
In one paragraph

Article in Journal of neuroinflammation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Ivan L Salazar *CNC-Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Ana S T Lourenço *CNC-Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Bruno ManadasCNC-Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Inês BaldeirasCNC-Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Cláudia FerreiraCoimbra Chemistry Centre, Department of Chemistry, University of Coimbra, Coimbra, Portugal.
Anabela Claro TeixeiraMolecular Neurobiology Group, Instituto de Biologia Molecular e Celular (IBMC), Instituto de Investigação e Inovação em Saúde (i3S), University of Porto, Porto, Portugal.
Vera M MendesCNC-Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Ana Margarida NovoNeurology Department, CHUC-Centro Hospitalar e Universitário de Coimbra, Coimbra, Portugal.
Rita MachadoNeurology Department, CHUC-Centro Hospitalar e Universitário de Coimbra, Coimbra, Portugal.
Sónia BatistaCNC-Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Maria do Carmo MacárioNeurology Department, CHUC-Centro Hospitalar e Universitário de Coimbra, Coimbra, Portugal.
Mário GrãosCNC-Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Lívia SousaNeurology Department, CHUC-Centro Hospitalar e Universitário de Coimbra, Coimbra, Portugal.
Maria João SaraivaMolecular Neurobiology Group, Instituto de Biologia Molecular e Celular (IBMC), Instituto de Investigação e Inovação em Saúde (i3S), University of Porto, Porto, Portugal.
Alberto A C C PaisCoimbra Chemistry Centre, Department of Chemistry, University of Coimbra, Coimbra, Portugal.
Carlos B DuarteCNC-Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal. cbduarte@ci.uc.pt.ORCID http://orcid.org/0000-0002-1474-0208
University of Coimbra · PTHospitais da Universidade de Coimbra · PTi3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto · PTBiocant · PT

Funding

european regional development fund CENTRO-01-0145-FEDER-000008:BrainHealth 2020european regional development fund Norte-01-0145-FEDER-000008fundação para a ciência e a tecnologia RNEM-REDE/1506/REM/2005fundação para a ciência e a tecnologia UIDB/04539/2020fundação para a ciência e a tecnologia UIDP/04539/2020national multiple sclerosis society RG-1601-07502
6 · The paper itself

Abstract

backgroundMultiple sclerosis is an inflammatory and degenerative disease of the central nervous system (CNS) characterized by demyelination and concomitant axonal loss. The lack of a single specific test, and the similarity to other inflammatory diseases of the central nervous system, makes it difficult to have a clear diagnosis of multiple sclerosis. Therefore, laboratory tests that allows a clear and definite diagnosis, as well as to predict the different clinical courses of the disease are of utmost importance. Herein, we compared the cerebrospinal fluid (CSF) proteome of patients with multiple sclerosis (in the relapse-remitting phase of the disease) and other diseases of the CNS (inflammatory and non-inflammatory) aiming at identifying reliable biomarkers of multiple sclerosis.

methodsCSF samples from the discovery group were resolved by 2D-gel electrophoresis followed by identification of the protein spots by mass spectrometry. The results were analyzed using univariate (Student's t test) and multivariate (Hierarchical Cluster Analysis, Principal Component Analysis, Linear Discriminant Analysis) statistical and numerical techniques, to identify a set of protein spots that were differentially expressed in CSF samples from patients with multiple sclerosis when compared with other two groups. Validation of the results was performed in samples from a different set of patients using quantitative (e.g., ELISA) and semi-quantitative (e.g., Western Blot) experimental approaches.

resultsAnalysis of the 2D-gels showed 13 protein spots that were differentially expressed in the three groups of patients: Alpha-1-antichymotrypsin, Prostaglandin-H2-isomerase, Retinol binding protein 4, Transthyretin (TTR), Apolipoprotein E, Gelsolin, Angiotensinogen, Agrin, Serum albumin, Myosin-15, Apolipoprotein B-100 and EF-hand calcium-binding domain-containing protein. ELISA experiments allowed validating part of the results obtained in the proteomics analysis and showed that some of the alterations in the CSF proteome are also mirrored in serum samples from multiple sclerosis patients. CSF of multiple sclerosis patients was characterized by TTR oligomerization, thus highlighting the importance of analyzing posttranslational modifications of the proteome in the identification of novel biomarkers of the disease.

conclusionsThe model built based on the results obtained upon analysis of the 2D-gels and in the validation phase attained an accuracy of about 80% in distinguishing multiple sclerosis patients and the other two groups.

Indexed as

Multiple SclerosisBiomarkersElectrophoresis, Gel, Two-DimensionalHumansProtein Processing, Post-TranslationalProteomeBiomarkersProteomeBiomarkersCerebrospinal fluid (CSF)Multiple sclerosisTransthyretin (TTR)

Identifiers

PMID35135578
PMCPMC8822857
OpenAlexW4210859580

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.