ArticleDatabase : the journal of biological databases and curation2022
PlantGF: an analysis and annotation platform for plant gene families.
Article in Database : the journal of biological databases and curation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- TWGFD: an integrative platform for tetraploid wheat gene family analysis.BMC genomics · 2026Article
- Design and implementation of a web-based platform for biodiversity valorization data management: from process modeling to user-centred evaluation.Database : the journal of biological databases and curation · 2026Article
- Cross-Activity Analysis of CRISPR/Cas9 Editing in Gene Families ofCurrent issues in molecular biology · 2025Article
- Genome-Wide Identification and Expression Analysis of TONNEAU1 Recruited Motif (TRM) Gene Family in Tomato.International journal of molecular sciences · 2025Article
- Overlooked and misunderstood: can glutathione conjugates be clues to understanding plant glutathione transferases?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024Review
- Article
- Research on Plant Genomics and Breeding 2.0.International journal of molecular sciences · 2024Article
- Article
- Genome-Wide Identification of PEBP Gene Family inInternational journal of molecular sciences · 2023Article
- Plant protein-coding gene families: Their origin and evolution.Frontiers in plant science · 2022Review
- The barleyFrontiers in genetics · 2022Article
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Authors and funding
6 authors.
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Abstract
Gene families contain genes that come from the same ancestor and have similar sequences and structures. They perform certain specific functions within and among different species. Currently, there is no complete process or platform for the rapid analysis of plant gene families. In this study, a comprehensive query and analysis platform of plant gene families, the Plant Gene Family Platform (PlantGF), was constructed. The platform is composed of four main parts: Search, Tools, Statistics and Auxiliary. A total of 2 909 580 gene family members were identified from 138 plant species in PlantGF. The data can be queried in the Search section through a user-friendly interface. A general process for gene family analysis, having nine steps, is provided. The platform also includes four online tools (HMM-Search, BLAST, MAFFT and HMMER) in the Tools section for useful additional analyses. The statistical analysis of the relevant gene families is shown on the Statistics page. Auxiliary pages are provided for data downloading. The datasets for all 138 plant species' protein sequences and their gene families can be acquired on the Download page. A user's manual and some useful links are displayed on the Manual and Links pages, respectively. To the best of our knowledge, PlantGF is the first comprehensive platform for studying plant gene families, and it will make important contributions to plant gene family-related research. Database URL: http://biodb.sdau.edu.cn/PGF/index.html.
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