Evidence map›Paper›PMID 35134055›Full record

ArticlePLoS genetics2022

Heterochiasmy and the establishment of gsdf as a novel sex determining gene in Atlantic halibut.

Rolf Brudvik Edvardsen, Ola Wallerman, Tomasz Furmanek, Lene Kleppe, Patric Jern, Andreas Wallberg, Erik Kjærner-Semb, Stig Mæhle, Sara Karolina Olausson, Elisabeth Sundström and 6 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 2 countries.

Rolf Brudvik EdvardsenInstitute of Marine Research, Bergen, Norway.ORCID 0000-0001-8430-8042
Ola WallermanUppsala University, Uppsala, Sweden.ORCID 0000-0003-1037-7904
Tomasz FurmanekInstitute of Marine Research, Bergen, Norway.ORCID 0000-0001-8577-9604
Lene KleppeInstitute of Marine Research, Bergen, Norway.
Patric JernUppsala University, Uppsala, Sweden.ORCID 0000-0003-3393-5825
Andreas WallbergUppsala University, Uppsala, Sweden.ORCID 0000-0002-9081-9663
Erik Kjærner-SembInstitute of Marine Research, Bergen, Norway.ORCID 0000-0001-7160-6710
Stig MæhleInstitute of Marine Research, Bergen, Norway.
Sara Karolina OlaussonInstitute of Marine Research, Storebø, Norway.
Elisabeth SundströmUppsala University, Uppsala, Sweden.ORCID 0000-0001-9526-8541
Torstein HarboeInstitute of Marine Research, Storebø, Norway.
Ragnfrid Mangor-JensenInstitute of Marine Research, Storebø, Norway.
Margareth MøgsterInstitute of Marine Research, Storebø, Norway.
Prescilla PerrichonInstitute of Marine Research, Storebø, Norway.ORCID 0000-0002-1410-878X
Birgitta NorbergInstitute of Marine Research, Storebø, Norway.ORCID 0000-0003-1550-5725
Carl-Johan RubinInstitute of Marine Research, Bergen, Norway.ORCID 0000-0001-8238-5052
Norwegian Institute of Marine Research · NOUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Atlantic Halibut (Hippoglossus hippoglossus) has a X/Y genetic sex determination system, but the sex determining factor is not known. We produced a high-quality genome assembly from a male and identified parts of chromosome 13 as the Y chromosome due to sequence divergence between sexes and segregation of sex genotypes in pedigrees. Linkage analysis revealed that all chromosomes exhibit heterochiasmy, i.e. male-only and female-only meiotic recombination regions (MRR/FRR). We show that FRR/MRR intervals differ in nucleotide diversity and repeat class content and that this is true also for other Pleuronectidae species. We further show that remnants of a Gypsy-like transposable element insertion on chr13 promotes early male specific expression of gonadal somatic cell derived factor (gsdf). Less than 4.5 MYA, this male-determining element evolved on an autosomal FRR segment featuring pre-existing male meiotic recombination barriers, thereby creating a Y chromosome. Our findings indicate that heterochiasmy may facilitate the evolution of genetic sex determination systems relying on linkage of sexually antagonistic loci to a sex-determining factor.

Indexed as

Recombination, GeneticSex Determination ProcessesAnimalsDNA Transposable ElementsEmbryo, NonmammalianFemaleFish ProteinsFlounderGene ExpressionGenomeMaleMeiosisPromoter Regions, GeneticRepetitive Sequences, Nucleic AcidSex ChromosomesY ChromosomeDNA Transposable ElementsFish Proteins

Identifiers

PMID35134055
PMCPMC8824383
OpenAlexW4210840556

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.