Evidence map›Paper›PMID 35132819›Full record

ArticleHepatology communications2022

miR-579-3p Controls Hepatocellular Carcinoma Formation by Regulating the Phosphoinositide 3-Kinase-Protein Kinase B Pathway in Chronically Inflamed Liver.

Cristina Quintavalle, Nathalie Meyer-Schaller, Stephanie Roessler, Diego Calabrese, Romina Marone, Tobias Riedl, Silvia Picco-Rey, Orestis A Panagiotou, Sarp Uzun, Salvatore Piscuoglio and 17 more

Open access · goldAbstract read
In one paragraph

Article in Hepatology communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 14 institutions in 5 countries.

Cristina QuintavalleInstitute of PathologyUniversity Hospital of BaselUniversity of BaselBaselSwitzerland.
Nathalie Meyer-SchallerInstitute of PathologyUniversity Hospital of BaselUniversity of BaselBaselSwitzerland.
Stephanie Roessler27178Institute of PathologyUniversity Hospital HeidelbergHeidelbergGermany.
Diego Calabrese27209Department of BiomedicineUniversity of BaselBaselSwitzerland.
Romina MaroneDepartment of BiomedicineUniversity Hospital of Basel, University of BaselBaselSwitzerland.
Tobias RiedlDivision of Chronic Inflammation and CancerGerman Cancer Research CenterHeidelbergGermany.
Silvia Picco-ReyInstitute of PathologyUniversity Hospital of BaselUniversity of BaselBaselSwitzerland.
Orestis A Panagiotou174610Department of Health Services, Policy and PracticeBrown University School of Public HealthProvidenceRIUSA.
Sarp UzunInstitute of PathologyUniversity Hospital of BaselUniversity of BaselBaselSwitzerland.
Salvatore PiscuoglioInstitute of PathologyUniversity Hospital of BaselUniversity of BaselBaselSwitzerland.ORCID 0000-0003-2686-2939
Tuyana Boldanova27209Department of BiomedicineUniversity of BaselBaselSwitzerland.
Chaoran B BianDepartment of Genetics and Genomic SciencesGraduate School of Biomedical SciencesIcahn School of Medicine at Mount SinaiNew YorkNYUSA.
David SemelaDivision of GastroenterologyKantonsspital St. GallenSt. GallenSwitzerland.
Wolfram JochumInstitute of PathologyKantonsspital St. GallenSt. GallenSwitzerland.
Gieri Cathomas367307Institute of PathologyKantonsspital BasellandLiestalSwitzerland.
Kirsten D Mertz367307Institute of PathologyKantonsspital BasellandLiestalSwitzerland.
Joachim Diebold30748Institute of PathologyLuzerner KantonsspitalLucerneSwitzerland.
Luca MazzucchelliIstituto Cantonale di PatologiaLocarnoSwitzerland.
Viktor H KoelzerDepartment of Pathology and Molecular PathologyUniversity and University Hospital ZurichZurichSwitzerland.
Achim WeberDepartment of Pathology and Molecular PathologyUniversity and University Hospital ZurichZurichSwitzerland.ORCID 0000-0003-0073-3637
Thomas DecaensInstitute for Advanced BiosciencesINSERM U1209/CNRS UMR 5309/Université Grenoble-AlpesGrenobleFrance.
Luigi M TerraccianoInstitute of PathologyUniversity Hospital of BaselUniversity of BaselBaselSwitzerland.
Mathias HeikenwalderDivision of Chronic Inflammation and CancerGerman Cancer Research CenterHeidelbergGermany.
Yujin HoshidaLiver Tumor ProgramSimmons Comprehensive Cancer CenterDivision of Digestive and Liver DiseasesUniversity of Texas Southwestern Medical CenterDallasTXUSA.
Jesper B AndersenBiotech Research and Innovation CenterDepartment of Health and Medical SciencesUniversity of CopenhagenCopenhagenDenmark.ORCID 0000-0003-1760-5244
Snorri S ThorgeirssonLaboratory of Experimental CarcinogenesisCenter for Cancer ResearchNational Cancer Institute-National Institutes of HealthBethesdaMDUSA.
Matthias S MatterInstitute of PathologyUniversity Hospital of BaselUniversity of BaselBaselSwitzerland.
University of Basel · CHGerman Cancer Research Center · DEKantonsspital Baselland · CHKantonsspital St. Gallen · CHUniversity Hospital of Zurich · CHBrown University · USCentre National de la Recherche Scientifique · FRHeidelberg University · DEIcahn School of Medicine at Mount Sinai · USIstituto Cantonale di Patologia · CHLuzerner Kantonsspital · CHNational Institutes of Health · USThe University of Texas Southwestern Medical Center · USUniversity of Copenhagen · DK

Funding

Reverse-engineering precision liver cancer chemopreventionR01CA233794 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HOSHIDA, YUJIN · 2019 to 2023
$3.5M
Molecular Prognostic Indicators in Liver Cirrhosis and CancerR01DK099558 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HOSHIDA, YUJIN · 2013 to 2016
$2.6M
NCI NIH HHS R01 CA233794NIDDK NIH HHS R01 DK099558
6 · The paper itself

Abstract

Chronic liver inflammation causes continuous liver damage with progressive liver fibrosis and cirrhosis, which may eventually lead to hepatocellular carcinoma (HCC). Whereas the 10-year incidence for HCC in patients with cirrhosis is approximately 20%, many of these patients remain tumor free for their entire lives. Clarifying the mechanisms that define the various outcomes of chronic liver inflammation is a key aspect in HCC research. In addition to a wide variety of contributing factors, microRNAs (miRNAs) have also been shown to be engaged in promoting liver cancer. Therefore, we wanted to characterize miRNAs that are involved in the development of HCC, and we designed a longitudinal study with formalin-fixed and paraffin-embedded liver biopsy samples from several pathology institutes from Switzerland. We examined the miRNA expression by nCounterNanostring technology in matched nontumoral liver tissue from patients developing HCC (n = 23) before and after HCC formation in the same patient. Patients with cirrhosis (n = 26) remaining tumor free within a similar time frame served as a control cohort. Comparison of the two cohorts revealed that liver tissue from patients developing HCC displayed a down-regulation of miR-579-3p as an early step in HCC development, which was further confirmed in a validation cohort. Correlation with messenger RNA expression profiles further revealed that miR-579-3p directly attenuated phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha (PIK3CA) expression and consequently protein kinase B (AKT) and phosphorylated AKT. In vitro experiments and the use of clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 technology confirmed that miR-579-3p controlled cell proliferation and cell migration of liver cancer cell lines. Conclusion: Liver tissues from patients developing HCC revealed changes in miRNA expression. miR-579-3p was identified as a novel tumor suppressor regulating phosphoinositide 3-kinase-AKT signaling at the early stages of HCC development.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsMicroRNAsGene Expression Regulation, NeoplasticHumansInflammationLiver CirrhosisLongitudinal StudiesPhosphatidylinositol 3-KinasePhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktMicroRNAsMIRN579 microRNA, humanPhosphatidylinositol 3-KinasePhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-akt

Identifiers

PMID35132819
PMCPMC9134798
OpenAlexW4210910002

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.