Evidence map›Paper›PMID 35127868›Full record

ArticleFrontiers in cardiovascular medicine2021

Deep Learning Analysis of Cardiac MRI in Legacy Datasets: Multi-Ethnic Study of Atherosclerosis.

Avan Suinesiaputra, Charlène A Mauger, Bharath Ambale-Venkatesh, David A Bluemke, Josefine Dam Gade, Kathleen Gilbert, Markus H A Janse, Line Sofie Hald, Conrad Werkhoven, Colin O Wu and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cardiovascular medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Towards a cardiovascular magnetic resonance foundation model for multi-task cardiac image analysis.Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance · 2025
    Article
  4. Article
  5. Article
  6. Article
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  8. Article
  9. A deep learning approach for fully automated cardiac shape modeling in tetralogy of Fallot.Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance · 2023
    Article
  10. Article
  11. Article
  12. Le Cœur en Sabot: shape associations with adverse events in repaired tetralogy of Fallot.Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance · 2022
    Article
  13. Longitudinal trajectories of left ventricular myocardial remodeling: associations with cardiovascular risk factors in the multi-ethnic study of atherosclerosis.Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 5 countries.

Avan SuinesiaputraDepartment of Anatomy and Medical Imaging, University of Auckland, Auckland, New Zealand.
Charlène A MaugerDepartment of Anatomy and Medical Imaging, University of Auckland, Auckland, New Zealand.
Bharath Ambale-VenkateshJohns Hopkins Medical Center, Baltimore, MD, United States.
David A BluemkeDepartment of Radiology, University of Wisconsin School of Medicine and Public Health, Madison, WI, United States.
Josefine Dam GadeDepartment of Biomedical Engineering and Informatics, School of Medicine and Health, Aalborg University, Aalborg, Denmark.
Kathleen GilbertAuckland Bioengineering Institute, University of Auckland, Auckland, New Zealand.
Markus H A JanseDepartment of Electrical Engineering, Eindhoven University of Technology, Eindhoven, Netherlands.
Line Sofie HaldDepartment of Biomedical Engineering and Informatics, School of Medicine and Health, Aalborg University, Aalborg, Denmark.
Conrad WerkhovenAuckland Bioengineering Institute, University of Auckland, Auckland, New Zealand.
Colin O WuDivision of Intramural Research, National Heart, Lung and Blood Institute, National Institutes of Health, Baltimore, MD, United States.
Joao A C LimaJohns Hopkins Medical Center, Baltimore, MD, United States.
Alistair A YoungFaculty of Life Sciences & Medicine, School of Biomedical Engineering & Imaging Sciences, King's College London, London, United Kingdom.
University of Auckland · NZAalborg University · DKJohns Hopkins Bayview Medical Center · USEindhoven University of Technology · NLKing's College London · GBNational Institutes of Health · USUniversity of Wisconsin–Madison · US

Funding

The Cardiac Atlas ProjectR01HL121754 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MCCULLOCH, ANDREW D., OMENS, JEFFREY H. · 2014 to 2023
$5.0M
NHLBI NIH HHS R01 HL121754
6 · The paper itself

Abstract

The Multi-Ethnic Study of Atherosclerosis (MESA), begun in 2000, was the first large cohort study to incorporate cardiovascular magnetic resonance (CMR) to study the mechanisms of cardiovascular disease in over 5,000 initially asymptomatic participants, and there is now a wealth of follow-up data over 20 years. However, the imaging technology used to generate the CMR images is no longer in routine use, and methods trained on modern data fail when applied to such legacy datasets. This study aimed to develop a fully automated CMR analysis pipeline that leverages the ability of machine learning algorithms to enable extraction of additional information from such a large-scale legacy dataset, expanding on the original manual analyses. We combined the original study analyses with new annotations to develop a set of automated methods for customizing 3D left ventricular (LV) shape models to each CMR exam and build a statistical shape atlas. We trained VGGNet convolutional neural networks using a transfer learning sequence between two-chamber, four-chamber, and short-axis MRI views to detect landmarks. A U-Net architecture was used to detect the endocardial and epicardial boundaries in short-axis images. The landmark detection network accurately predicted mitral valve and right ventricular insertion points with average error distance <2.5 mm. The agreement of the network with two observers was excellent (intraclass correlation coefficient >0.9). The segmentation network produced average Dice score of 0.9 for both myocardium and LV cavity. Differences between the manual and automated analyses were small, i.e., <1.0 ± 2.6 mL/m

Indexed as

cardiac anatomydeep learningleft ventriclemachine learningMRI

Identifiers

PMID35127868
PMCPMC8813768
OpenAlexW3209073411

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.