Evidence map›Paper›PMID 35127035›Full record

ArticleEcology and evolution2022

CYP1A expression in freshwater fish of western New York as an indicator of pollution levels.

Rebecca Williams, Theresa Taggart, Kayla Ganger, Teri Koetsier, Seema Johnson, Amber Dinchman

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rebecca WilliamsHoughton College Houghton New York USA.ORCID https://orcid.org/0000-0002-0021-2578
Theresa TaggartHoughton College Houghton New York USA.
Kayla GangerHoughton College Houghton New York USA.
Teri KoetsierHoughton College Houghton New York USA.
Seema JohnsonHoughton College Houghton New York USA.
Amber DinchmanCollege of Wooster Wooster Ohio USA.
Houghton University · USCollege of Wooster · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Various species of freshwater fish regulate the expression of certain proteins in response to environmental contamination. Previous research has shown that CYP1A expression increases in response to contaminant levels and can result in increased tumor formation. Fish in contaminated environments would thus benefit by downregulating the expression of CYP1A to reduce tumor prevalence as an adaptive strategy. Alternatively, monitoring of the CYP1A protein in fish can serve as a bioindicator of the pollution level of an environment. This study evaluated CYP1A expression in twelve different species of freshwater fish from seven bodies of water throughout western NY including Cuba Lake, Genesee River, Hanging Bog, Love Canal, Moss Lake, Rushford Lake, and Tifft Nature Preserve. Western blot analysis was used to measure CYP1A expression as a marker of site pollution and potential fish population adaptation. It was hypothesized that low CYP1A expression at a site with known contamination would suggest signs of adaptation to pollution levels present. Furthermore, if at least one sample from a species showed CYP1A expression, then the CYP1A antibody (Caymen Chemical, USA; 173132) had compatibility with that species, eliminating falsely suspected adaptation. The results from this study suggest possible adaptation of fish may be occurring in the polluted Tifft Nature Preserve and Genesee River. In contrast, CYP1A expression in fish from Cuba Lake, Hanging Bog, Love Canal, Moss Lake, and Rushford Lake appear to represent known pollution levels and adaptation is not likely occurring. Results from this study are preliminary and next steps include collection and analysis of sediment to provide a stronger correlation between pollution at sites and CYP1A expression.

Indexed as

adaptationCYP1Afishfreshwaterpollutionwestern New York

Identifiers

PMID35127035
PMCPMC8796950
OpenAlexW4225995867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.