Evidence map›Paper›PMID 35126042›Full record

ArticleFrontiers in neuroscience2021

Decontaminate Traces From Fluorescence Calcium Imaging Videos Using Targeted Non-negative Matrix Factorization.

Yijun Bao, Emily Redington, Agnim Agarwal, Yiyang Gong

Abstract read
In one paragraph

Article in Frontiers in neuroscience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yijun BaoDepartment of Biomedical Engineering, Duke University, Durham, NC, United States.
Emily RedingtonDepartment of Biomedical Engineering, Duke University, Durham, NC, United States.
Agnim AgarwalNorth Carolina School of Science and Mathematics, Durham, NC, United States.
Yiyang GongDepartment of Biomedical Engineering, Duke University, Durham, NC, United States.

Funding

Voltage Imaging Dissection of the Mammalian CortexDP2NS111505 · NINDS · DUKE UNIVERSITY · PI GONG, YIYANG · 2018 to 2018
$2.4M
Large-scale cellular-resolution voltage imaging of the zebrafish brainUF1NS107678 · NINDS · DUKE UNIVERSITY · PI GONG, YIYANG · 2018 to 2018
$1.2M
NINDS NIH HHS DP2 NS111505NINDS NIH HHS UF1 NS107678
6 · The paper itself

Abstract

Fluorescence microscopy and genetically encoded calcium indicators help understand brain function by recording large-scale

Indexed as

decontaminationfluorescence calcium imagingneuroimagingnon-negative matrix factorizationone-photon imagingsignal unmixingtwo-photon imaging

Identifiers

PMID35126042
PMCPMC8815790

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.