Evidence map›Paper›PMID 35125678›Full record

ArticleStatistics and computing2021

Stochastic approximation cut algorithm for inference in modularized Bayesian models.

Yang Liu, Robert J B Goudie

Abstract read
In one paragraph

Article in Statistics and computing, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Interoperability of statistical models in pandemic preparedness: principles and reality.Statistical science : a review journal of the Institute of Mathematical Statistics · 2022
    Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yang LiuMRC Biostatistics Unit, University of Cambridge, Cambridge, UK.ORCID https://orcid.org/0000-0001-7221-5877
Robert J B GoudieMRC Biostatistics Unit, University of Cambridge, Cambridge, UK.

Funding

Medical Research Council MC_UU_00002/2
6 · The paper itself

Abstract

Bayesian modelling enables us to accommodate complex forms of data and make a comprehensive inference, but the effect of partial misspecification of the model is a concern. One approach in this setting is to modularize the model and prevent feedback from suspect modules, using a cut model. After observing data, this leads to the cut distribution which normally does not have a closed form. Previous studies have proposed algorithms to sample from this distribution, but these algorithms have unclear theoretical convergence properties. To address this, we propose a new algorithm called the stochastic approximation cut (SACut) algorithm as an alternative. The algorithm is divided into two parallel chains. The main chain targets an approximation to the cut distribution; the auxiliary chain is used to form an adaptive proposal distribution for the main chain. We prove convergence of the samples drawn by the proposed algorithm and present the exact limit. Although SACut is biased, since the main chain does not target the exact cut distribution, we prove this bias can be reduced geometrically by increasing a user-chosen tuning parameter. In addition, parallel computing can be easily adopted for SACut, which greatly reduces computation time.

Indexed as

Cutting feedbackDiscretizationIntractable normalizing functionsStochastic approximation Monte Carlo

Identifiers

PMID35125678
PMCPMC7612314

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.