Evidence map›Paper›PMID 35121965›Full record

ArticleNature cancer2020

A biobank of small cell lung cancer CDX models elucidates inter- and intratumoral phenotypic heterogeneity.

Kathryn L Simpson, Ruth Stoney, Kristopher K Frese, Nicole Simms, William Rowe, Simon P Pearce, Sam Humphrey, Laura Booth, Derrick Morgan, Marek Dynowski and 16 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 115 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
115citing papers in PubMed, 1 pooled it
9.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

115 citing papers in PubMed, 1 synthesis or guideline pooled it, 165 citations in OpenAlex.

  1. Advances in Engineering Human Tissue Models.Frontiers in bioengineering and biotechnology · 2020
    Pooled it
  2. Article
  3. Article
  4. Liquid biopsy in solid tumours: expert opinion paper of the European society of pathology.Virchows Archiv : an international journal of pathology · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. The Five-Decade Journey of Small Cell Lung Cancer.Cancer communications (London, England) · 2026
    Review
  17. Review
  18. Article
  19. Article
  20. MET and SLFN11 as a Players in the SCLC Molecular Subtyping Game.International journal of molecular sciences · 2025
    Article

55 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 4 institutions in 2 countries.

Kathryn L SimpsonCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Ruth StoneyCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Kristopher K FreseCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Nicole SimmsCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
William RoweCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Simon P PearceCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Sam HumphreyCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Laura BoothCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Derrick MorganCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Marek DynowskiScientific Computing Core Facility, Cancer Research UK Manchester Institute, The University of Manchester, Manchester, UK.
Francesca TrapaniCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Alessia CatozziCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Mitchell RevillCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Thomas HelpsCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Melanie GalvinCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Luc GirardHamon Center for Therapeutic Oncology Research, Department of Pharmacology, UT Southwestern Medical Center, Dallas, TX, USA.
Daisuke NonakaThe Christie NHS Foundation Trust, Manchester, UK.
Louise CarterThe Christie NHS Foundation Trust, Manchester, UK.
Matthew G KrebsThe Christie NHS Foundation Trust, Manchester, UK.ORCID http://orcid.org/0000-0001-7540-3064
Natalie CookThe Christie NHS Foundation Trust, Manchester, UK.
Mathew CarterCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Lynsey PriestCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.
Alastair KerrCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK.ORCID http://orcid.org/0000-0001-9207-6050
Adi F GazdarHamon Center for Therapeutic Oncology Research, Department of Pharmacology, UT Southwestern Medical Center, Dallas, TX, USA.
Fiona BlackhallThe Christie NHS Foundation Trust, Manchester, UK.
Caroline DiveCancer Research UK Manchester Institute Cancer Biomarker Centre, University of Manchester, Manchester, UK. Caroline.Dive@manchester.ac.uk.ORCID http://orcid.org/0000-0002-1726-8850
University of Manchester · GBCancer Research UK · GBSouthwestern Medical CenterThe Christie NHS Foundation Trust · GB

Funding

Cancer Research UK 29420Cancer Research UK 29569Cancer Research UK A20465Cancer Research UK A25146Cancer Research UK A27412
6 · The paper itself

Abstract

Although small cell lung cancer (SCLC) is treated as a homogeneous disease, biopsies and preclinical models reveal heterogeneity in transcriptomes and morphology. SCLC subtypes were recently defined by neuroendocrine transcription factor (NETF) expression. Circulating-tumor-cell-derived explant models (CDX) recapitulate donor patients' tumor morphology, diagnostic NE marker expression and chemotherapy responses. We describe a biobank of 38 CDX models, including six CDX pairs generated pretreatment and at disease progression revealing complex intra- and intertumoral heterogeneity. Transcriptomic analysis confirmed three of four previously described subtypes based on ASCL1, NEUROD1 and POU2F3 expression and identified a previously unreported subtype based on another NETF, ATOH1. We document evolution during disease progression exemplified by altered MYC and NOTCH gene expression, increased 'variant' cell morphology, and metastasis without strong evidence of epithelial to mesenchymal transition. This CDX biobank provides a research resource to facilitate SCLC personalized medicine.

Indexed as

Lung NeoplasmsSmall Cell Lung CarcinomaBiological Specimen BanksDisease ProgressionEpithelial-Mesenchymal TransitionGene Expression Regulation, NeoplasticHumans

Identifiers

PMID35121965
OpenAlexW3015968101

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.