Evidence map›Paper›PMID 35121664›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

HYL1-CLEAVAGE SUBTILASE 1 (HCS1) suppresses miRNA biogenesis in response to light-to-dark transition.

Hyun Ju Jung, Suk Won Choi, Kyung-Hwan Boo, Jee-Eun Kim, Young Kyoung Oh, Min Kyun Han, Moon Young Ryu, Chang Woo Lee, Christian Møller, Pratik Shah and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Plant microRNA maturation and function.Nature reviews. Molecular cell biology · 2026
    Review
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  14. Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. Article
  16. InFrontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Hyun Ju JungDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.ORCID 0000-0002-2554-4042
Suk Won ChoiDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.ORCID 0000-0001-9372-1947
Kyung-Hwan BooSubtropical/Tropical Organism Gene Bank, Department of Biotechnology, College of Applied Life Science, Jeju National University, Jeju 63243, Korea.ORCID 0000-0002-9024-2999
Jee-Eun KimDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.
Young Kyoung OhDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.ORCID 0000-0001-8351-1911
Min Kyun HanDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.ORCID 0000-0002-1497-9657
Moon Young RyuXenohelix Research Institute, Incheon 21984, Korea.
Chang Woo LeeXenohelix Research Institute, Incheon 21984, Korea.
Christian MøllerDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.ORCID 0000-0002-2919-6380
Pratik ShahDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.ORCID 0000-0003-4755-1267
Gu Min KimDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.
Woorim YangDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea.
Seok Keun ChoXenohelix Research Institute, Incheon 21984, Korea chosk@xenohelix.com yangsw@yonsei.ac.kr.
Seong Wook YangDepartment of Systems Biology, Institute of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Korea; chosk@xenohelix.com yangsw@yonsei.ac.kr.
Yonsei University · KRJeju National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The core plant microprocessor consists of DICER-LIKE 1 (DCL1), SERRATE (SE), and HYPONASTIC LEAVES 1 (HYL1) and plays a pivotal role in microRNA (miRNA) biogenesis. However, the proteolytic regulation of each component remains elusive. Here, we show that HYL1-CLEAVAGE SUBTILASE 1 (HCS1) is a cytoplasmic protease for HYL1-destabilization. HCS1-excessiveness reduces HYL1 that disrupts miRNA biogenesis, while HCS1-deficiency accumulates HYL1. Consistently, we identified the HYL1

Indexed as

ArabidopsisArabidopsis ProteinsCell Cycle ProteinsCell NucleusGene Expression Regulation, PlantMicroRNAsPlant LeavesRNA-Binding ProteinsRNA Processing, Post-TranscriptionalUbiquitin-Protein LigasesArabidopsis ProteinsCell Cycle ProteinsMicroRNAsRNA-Binding ProteinsUbiquitin-Protein LigasesCOP1 E3 ligaseHYL1 proteostasislight/dark transitionmiRNA biogenesissubtilisin-like protease

Identifiers

PMID35121664
PMCPMC8833217
OpenAlexW4210779518

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.