Evidence map›Paper›PMID 35121111›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2022

Evaluation of cytosine base editing and adenine base editing as a potential treatment for alpha-1 antitrypsin deficiency.

Michael S Packer, Vivek Chowdhary, Genesis Lung, Lo-I Cheng, Yvonne Aratyn-Schaus, Dominique Leboeuf, Sarah Smith, Aalok Shah, Delai Chen, Marina Zieger and 5 more

Open access · greenAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
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  11. International journal of biological sciences · 2026
    Review
  12. A compact base editor rescues AATD-associated liver and lung disease in mouse models.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  13. Current trends in gene therapy to treat inherited disorders of the brain.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  14. Review
  15. Review
  16. Gene Therapy for Inherited Liver Disease: To Add or to Edit.International journal of molecular sciences · 2024
    Review
  17. Article
  18. Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Michael S PackerBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Vivek ChowdharyGene Therapy Department, UMass Medical School, 55 Lake Avenue North, Worcester, MA 01655, USA.
Genesis LungBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Lo-I ChengBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Yvonne Aratyn-SchausBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Dominique LeboeufBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Sarah SmithBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Aalok ShahBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Delai ChenBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Marina ZiegerGene Therapy Department, UMass Medical School, 55 Lake Avenue North, Worcester, MA 01655, USA.
Brian J CaffertyBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Bo YanBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Giuseppe CiaramellaBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA.
Francine M GregoireBeam Therapeutics, 238 Main Street, Cambridge, MA 02142, USA. Electronic address: fgregoire@beamtx.com.
Christian MuellerGene Therapy Department, UMass Medical School, 55 Lake Avenue North, Worcester, MA 01655, USA. Electronic address: chris.mueller@umassmed.edu.
Beam Therapeutics (United States) · USUniversity of Massachusetts Chan Medical School · USUMass Memorial Health Care · US

Funding

Viral Vector CoreP01HL131471 · NHLBI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FLOTTE, TERENCE R. · 2016 to 2020
$11.3M
Nuclease free gene editing approaches to treat alpha-1 antitrypsin diseaseR01DK098252 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FLOTTE, TERENCE R. · 2013 to 2022
$3.0M
NHLBI NIH HHS P01 HL131471NIDDK NIH HHS R01 DK098252
6 · The paper itself

Abstract

Alpha-1 antitrypsin deficiency (AATD) is a rare autosomal codominant disease caused by mutations within the SERPINA1 gene. The most prevalent variant in patients is PiZ SERPINA1, containing a single G > A transition mutation. PiZ alpha-1 antitrypsin (AAT) is prone to misfolding, leading to the accumulation of toxic aggregates within hepatocytes. In addition, the abnormally low level of AAT secreted into circulation provides insufficient inhibition of neutrophil elastase within the lungs, eventually causing emphysema. Cytosine and adenine base editors enable the programmable conversion of C⋅G to T⋅A and A⋅T to G⋅C base pairs, respectively. In this study, two different base editing approaches were developed: use of a cytosine base editor to install a compensatory mutation (p.Met374Ile) and use of an adenine base editor to mediate the correction of the pathogenic PiZ mutation. After treatment with lipid nanoparticles formulated with base editing reagents, PiZ-transgenic mice exhibited durable editing of SERPINA1 in the liver, increased serum AAT, and improved liver histology. These results indicate that base editing has the potential to address both lung and liver disease in AATD.

Indexed as

alpha 1-Antitrypsin DeficiencyGene EditingAdeninealpha 1-AntitrypsinAnimalsCytosineHumansLiposomesMiceMutationNanoparticlesAdeninealpha 1-AntitrypsinCytosineLipid NanoparticlesLiposomesSerpina1a protein, mousealpha-1 antitrypsinbase editinggene editinglipid nanoparticlesmRNA

Identifiers

PMID35121111
PMCPMC9077367
OpenAlexW4210390121

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.