Evidence map›Paper›PMID 35119567›Full record

ArticleRice (New York, N.Y.)2022

TAL Effectors with Avirulence Activity in African Strains of Xanthomonas oryzae pv. oryzae.

Marlène Lachaux, Emilie Thomas, Adam J Bogdanove, Boris Szurek, Mathilde Hutin

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Marlène LachauxPlant Health Institute of Montpellier, Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Montpellier, France.
Emilie ThomasPlant Health Institute of Montpellier, Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Montpellier, France.
Adam J BogdanovePlant Pathology and Plant Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, 14853, USA.
Boris SzurekPlant Health Institute of Montpellier, Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Montpellier, France. boris.szurek@ird.fr.ORCID http://orcid.org/0000-0002-1808-7082
Mathilde HutinPlant Health Institute of Montpellier, Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Montpellier, France. mathilde.hutin@ird.fr.
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCornell University · US

Funding

Directorate for Biological Sciences IOS-1444511
6 · The paper itself

Abstract

backgroundXanthomonas oryzae pv. oryzae (Xoo) causes bacterial leaf blight, a devastating disease of rice. Among the type-3 effectors secreted by Xoo to support pathogen virulence, the Transcription Activator-Like Effector (TALE) family plays a critical role. Some TALEs are major virulence factors that activate susceptibility (S) genes, overexpression of which contributes to disease development. Host incompatibility can result from TALE-induced expression of so-called executor (E) genes leading to a strong and rapid resistance response that blocks disease development. In that context, the TALE functions as an avirulence (Avr) factor. To date no such avirulence factors have been identified in African strains of Xoo.

resultsWith respect to the importance of TALEs in the Rice-Xoo pathosystem, we aimed at identifying those that may act as Avr factor within African Xoo. We screened 86 rice accessions, and identified 12 that were resistant to two African strains while being susceptible to a well-studied Asian strain. In a gain of function approach based on the introduction of each of the nine tal genes of the avirulent African strain MAI1 into the virulent Asian strain PXO99

conclusionWe identified and characterized TalD and TalI as two African Xoo TALEs with avirulence activity on IR64 and CT13432 respectively. Resistance of CT13432 against African Xoo results from the combination of two mechanisms, one relying on the TalI-mediated induction of an unknown executor gene and the other on an Xa1-like gene or allele.

Indexed as

Bacterial leaf blightExecutor geneGermplasmRicetruncTALE/iTALEXa1-like resistance

Identifiers

PMID35119567
PMCPMC8816977
OpenAlexW4226376677

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.