Evidence map›Paper›PMID 35118385›Full record

ArticleNeuro-oncology advances

A multiparametric pharmacogenomic strategy for drug repositioning predicts therapeutic efficacy for glioblastoma cell lines.

Ashish H Shah, Robert Suter, Pavan Gudoor, Tara T Doucet-O'Hare, Vasileios Stathias, Iahn Cajigas, Macarena de la Fuente, Vaidya Govindarajan, Alexis A Morell, Daniel G Eichberg and 8 more

Open access · goldAbstract read
In one paragraph

Article in Neuro-oncology advances. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Ashish H ShahDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.ORCID https://orcid.org/0000-0002-0183-1274
Robert SuterDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.
Pavan GudoorDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.
Tara T Doucet-O'HareNeuro-Oncology Branch, National Cancer Institute, Bethesda, Maryland, USA.
Vasileios StathiasDepartment of Molecular and Cellular Pharmacology, University of Miami, Miami, Florida, USA.
Iahn CajigasDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.ORCID https://orcid.org/0000-0002-5808-453X
Macarena de la FuenteDepartment of Neurology, University of Miami Miller School of Medicine, Miami, Florida, USA.
Vaidya GovindarajanDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.
Alexis A MorellDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.
Daniel G EichbergDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.
Evan LutherDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.ORCID https://orcid.org/0000-0001-9164-4984
Victor M LuDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.
John HeissSurgical Neurology Division, NINDS National Institute of Health, Bethesda, Maryland, USA.
Ricardo J KomotarDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.ORCID https://orcid.org/0000-0001-6631-7551
Michael E IvanDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.ORCID https://orcid.org/0000-0002-4798-4989
Stephan SchurerDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.
Mark R GilbertNeuro-Oncology Branch, National Cancer Institute, Bethesda, Maryland, USA.
Nagi G AyadDepartment of Neurological Surgery, Sylvester Comprehensive Cancer Center, Miami, Florida, USA.
Sylvester Comprehensive Cancer Center · USNational Cancer Institute · USUniversity of Miami · USNational Institutes of Health · US

Funding

Brain Tumor Clinical and Clinical Research Program (Clinical Support Services)ZIDBC011642 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI OZER, BYRAM · 2015 to 2025
$23.4M
Molecular Pathogenesis of NeoplasiaZIANS003052 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI HEISS, JOHN · 2009 to 2025
$20.7M
University of MIami Neurosurgery eDucation Strategy UMINDSR25NS108937 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI DIETRICH, W DALTON, IAVARONE, ANTONIO · 2019 to 2024
$558k
NINDS NIH HHS R25 NS108937
6 · The paper itself

Abstract

backgroundPoor prognosis of glioblastoma patients and the extensive heterogeneity of glioblastoma at both the molecular and cellular level necessitates developing novel individualized treatment modalities via genomics-driven approaches.

methodsThis study leverages numerous pharmacogenomic and tissue databases to examine drug repositioning for glioblastoma. RNA-seq of glioblastoma tumor samples from The Cancer Genome Atlas (TCGA,

resultsSignificant correlations were identified between sRGES and drug efficacy in GBM cell lines in both ChEMBL(r = 0.37,

conclusionsOur studies suggest that reversal of glioblastoma disease signature correlates with drug potency for various GBM subtypes. This multiparametric approach may set the foundation for an early-phase personalized -omics clinical trial for glioblastoma by effectively identifying drugs that are capable of reversing the disease signature and have favorable pharmacokinetic and safety profiles.

Indexed as

bioinformaticsdrug repositioningglioblastomaLINCS

Identifiers

PMID35118385
PMCPMC8807341
OpenAlexW4206153854

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.