Evidence map›Paper›PMID 35117724›Full record

ArticleTranslational cancer research2020

Elevated expression of mitochondrial transcription elongation factor (TEFM) predicts poor prognosis in low grade glioma-an analysis of the Cancer Genome Atlas (TCGA) dataset.

Sufen Li, Weisi Wang, Jiaji Zi, Meitao Sun, Wen Mei, Na Yang, Ruopeng Zhang, Min Yu, Wei Xiong

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Article in Translational cancer research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sufen Li *College of Basic Medical Sciences, Dali University, Dali 671000, China.
Weisi Wang *College of Basic Medical Sciences, Dali University, Dali 671000, China.
Jiaji ZiCollege of Basic Medical Sciences, Dali University, Dali 671000, China.
Meitao SunCollege of Basic Medical Sciences, Dali University, Dali 671000, China.
Wen MeiCollege of Basic Medical Sciences, Dali University, Dali 671000, China.
Na YangCollege of Basic Medical Sciences, Dali University, Dali 671000, China.
Ruopeng ZhangDepartment of Reproductive Medicine, The First Affiliated Hospital of Dali University, Dali 671000, China.
Min YuSchool of Life Sciences, Yunnan University, Kunming 650091, China.
Wei XiongCollege of Basic Medical Sciences, Dali University, Dali 671000, China.
Dali University · CNHangzhou Medical College · CNYunnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMitochondrial transcription elongation factor (TEFM) is a key molecule for mitochondrial DNA (mtDNA) replication-transcription switch. TEFM regulates both transcription elongation and RNA processing in mitochondria. However, the expression level and prognostic value of TEFM in low grade glioma (LGG) remain unclear. Therefore, in this study, we aimed to evaluate the clinical significance and the prognostic value of TEFM in LGG based on publicly available data.

methodsThe relative mRNA expression level of TEFM in non-tumor brain tissues and LGG tissues were retrieved from Gene Expression Profiling Interactive Analysis (GEPIA). The RNA-Seq expression of TEFM and clinical information in LGG patients were collected from the updated the Cancer Genome Atlas (TCGA) database by using R3.6.1 software. Next, the relationship between the mRNA expression of TEFM and clinicopathological characteristics were analyzed. Kaplan-Meier survival curves of overall survival (OS) and disease-free survival (DFS) were implemented for the relationship between the mRNA expression of TEFM and the prognosis of LGG patients. A Cox regression model was performed for the multivariate analysis of the factors affected the prognosis of LGG patients. GEPIA online tool was used to analyze the correlation between

resultsGEPIA analysis showed that the mRNA expression levels of TEFM in LGG were significantly higher than that of non-tumor tissue. Moreover, the mRNA expression of TEFM is significantly correlated with age, World Health Organization (WHO) grade, pathological types, headache history and supratentorial location (P<0.05). Kaplan-Meier analysis showed that a high expression level of TEFM mRNA indicated a poor prognosis in OS rate (log-rank, P<0.01). Multivariate Cox regression analysis showed that age, WHO grade, pathological types and supratentorial location were the independent prognostic factors of LGG patients. The mRNA expression levels of TEFM gene were positively correlated with the

conclusionsOur findings disclosed that the expression of TEFM mRNA was significantly upregulated in human LGG tissues compared to non-tumor brain tissues. More importantly, the elevated expression of TEFM mRNA may potentially predict poor OS in LGG patients.

Indexed as

low grade glioma (LGG)mitochondrial transcription elongation factor (TEFM)prognosisThe Cancer Genome Atlas dataset (TCGA dataset)

Identifiers

PMID35117724
PMCPMC8798344
OpenAlexW3020063959

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.