Evidence map›Paper›PMID 35116776›Full record

ArticleTranslational cancer research2019

Microarray-based differential expression profiling of long noncoding RNAs and messenger RNAs in formalin-fixed paraffin-embedded human papillary thyroid carcinoma samples.

Hui-Xian Yan, Jin Du, Jing Fu, Wei Huang, Li-Meng Jia, Pang Ping, Ling Zhao, Ye-Qiong Song, Xiao-Meng Jia, Jing-Tao Dou and 4 more

Open access · diamondAbstract read
In one paragraph

Article in Translational cancer research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Surgical Management of 48 Patients with Retrosternal Goiter and Tracheal Stenosis: A Retrospective Clinical Study from a Single Surgical Center.Medical science monitor : international medical journal of experimental and clinical research · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Hui-Xian Yan *Department and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Jin Du *Department and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Jing FuDepartment of Pathology, Beijing Haidian Hospital, Beijing Haidian Section of Peking University Third Hospital, Beijing 100080, China.
Wei HuangDepartment of Endocrinology, Beijing Haidian Hospital, Beijing Haidian Section of Peking University Third Hospital, Beijing 100080, China.
Li-Meng JiaDepartment of General Surgery, Beijing Haidian Hospital, Beijing Haidian Section of Peking University Third Hospital, Beijing 100080, China.
Pang PingDepartment and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Ling ZhaoDepartment and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Ye-Qiong SongDepartment and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Xiao-Meng JiaDepartment and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Jing-Tao DouDepartment and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Yi-Ming MuDepartment and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Fu-Lin WangDepartment of Pathology, PLA General Hospital, Beijing 100853, China.
Wen TianDepartment of General Surgery, PLA General Hospital, Beijing 100853, China.
Zhao-Hui LyuDepartment and Key Laboratory of Endocrinology and Metabolism, PLA General Hospital, Beijing 100853, China.
Chinese PLA General Hospital · CNBeijing Haidian Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLong noncoding RNAs (lncRNAs) can regulate the expression of genes at almost every level. The altered expression of lncRNAs was observed in many kinds of cancers. Until recently, few studies have focused on the function of lncRNAs in the context of papillary thyroid carcinoma (PTC).

methodsIn the current study, we collected seven PTC and nodular goiter tissue samples and explored mRNA and lncRNA expression patterns in these samples by microarray.

resultsWe observed aberrant expression of 94 lncRNAs and 99 mRNAs in the seven PTC samples as compared to the nodular goiter tissue [fold change (FC) ≥2.0; P<0.01]. To confirm these microarray results, quantitative polymerase chain reaction (q-PCR) was performed to assess the expression of three randomly selected differentially expressed mRNAs and lncRNAs, confirming our microarray findings significantly. We then performed gene ontology (GO) and kyoto encyclopedia of genes and genomes (KEGG) analyses to systematically characterize the twelve significantly differential genes. A co-expression analysis revealed that the lncRNAs n382996, n342483, and n409114 were closely related to the regulation of MT1G, MT1H, and MT1F.

conclusionsIn the present study a string of novel lncRNAs associated with PTC were identified. Further study of these lncRNAs should be performed to identify novel target molecules which may improve diagnosis and treatment of PTC.

Indexed as

Long noncoding RNA (lncRNA)messenger RNAmicroarraypapillary thyroid carcinoma (PTC)

Identifiers

PMID35116776
PMCPMC8797411
OpenAlexW4238921570

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.