Evidence map›Paper›PMID 35116589›Full record

ArticleTranslational cancer research2021

Development of a novel autophagy-related gene prognostic signature for gastric cancer.

Fanni Li, Yukui Shang, Haowei Zhang, Junjun She, Guanghui Wang, Qi Sun

Open access · diamondAbstract read
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Article in Translational cancer research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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  3. Investigation of the Mechanism ofInternational journal of general medicine · 2024
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Fanni LiDepartment of Talent Highland, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Yukui ShangDepartment of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, China.
Haowei ZhangDepartment of General Surgery, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Junjun SheDepartment of General Surgery, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Guanghui WangDepartment of General Surgery, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Qi SunDepartment of General Surgery, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
First Affiliated Hospital of Xi'an Jiaotong University · CNTsinghua University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA growing number of evidence has revealed the vital role of autophagy in pathological processes of cancer, including gastric cancer (GC). However, many previous studies only focused on exploring single pathway or limited genes of interest in GC, which only reflected partial functions of autophagy. The present study aimed to construct an autophagy-related risk signature for GC.

methodsDifferentially expressed autophagy-related genes (ARGs) in GC and non-tumor samples were screened through The Cancer Genome Atlas (TCGA) database, followed by bioinformatics analysis using the Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) platforms. Prognosis-related ARGs were generated by univariate and multivariate Cox regression test.

resultsA total of seven prognosis-related ARGs (HSPB8, NRG2, GABARAPL1, TMEM74, DLC1, MAP1LC3C and NRG3) were determined to establish a prognostic index (PI) model, which was demonstrated to be an independent prognostic indicator for patients with GC. More importantly, it was successfully validated in an external cohort of patients from the GSE15460 dataset, indicating the useful reproducibility of this signature. In addition, the PI model was associated with immune cell infiltration estimates in GC.

conclusionsTaken together, the present study suggested that the seven ARGs-related signature could serve as an independent prognostic indicator for patients with GC.

Indexed as

Autophagy-related genes (ARGs)gastric cancer (GC)prognostic index (PI)

Identifiers

PMID35116589
PMCPMC8797385
OpenAlexW3170375588

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.