Evidence map›Paper›PMID 35115688›Full record

ReviewNature genetics2022

Challenges and future directions for studying effects of host genetics on the gut microbiome.

Serena Sanna, Alexander Kurilshikov, Adriaan van der Graaf, Jingyuan Fu, Alexandra Zhernakova

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pharmacomicrobiomics-driven targeted drug delivery for precision microbiome modulation.Daru : journal of Faculty of Pharmacy, Tehran University of Medical Sciences · 2026
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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Serena SannaInstitute for Genetic and Biomedical Research (IRGB), National Research Council (CNR), Monserrato, Cagliari, Italy. serena.sanna@irgb.cnr.it.ORCID http://orcid.org/0000-0002-3768-1749
Alexander KurilshikovDepartment of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands.ORCID http://orcid.org/0000-0003-2541-5627
Adriaan van der GraafDepartment of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands.ORCID http://orcid.org/0000-0002-8898-8484
Jingyuan FuDepartment of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands.
Alexandra ZhernakovaDepartment of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands. sasha.zhernakova@gmail.com.ORCID http://orcid.org/0000-0002-4574-0841

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human gut microbiome is a complex ecosystem that is involved in its host's metabolism, immunity and health. Although interindividual variations in gut microbial composition are mainly driven by environmental factors, some gut microorganisms are heritable and thus can be influenced by host genetics. In the past 5 years, 12 microbial genome-wide association studies (mbGWAS) with >1,000 participants have been published, yet only a few genetic loci have been consistently confirmed across multiple studies. Here we discuss the state of the art for mbGWAS, focusing on current challenges such as the heterogeneity of microbiome measurements and power issues, and we elaborate on potential future directions for genetic analysis of the microbiome.

Indexed as

Gastrointestinal MicrobiomeGenetic VariationGenome-Wide Association StudyQuantitative Trait LociABO Blood-Group SystemBiological Variation, PopulationFucosyltransferasesGalactoside 2-alpha-L-fucosyltransferaseGenomicsHost Microbial InteractionsHumansLactasePolymorphism, Single NucleotideABO Blood-Group SystemFucosyltransferasesGalactoside 2-alpha-L-fucosyltransferaseLactase

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.