Evidence map›Paper›PMID 35114945›Full record

ArticleBMC microbiology2022

Emergence of amoxicillin resistance and identification of novel mutations of the pbp1A gene in Helicobacter pylori in Vietnam.

Trung Thien Tran, Anh Tuan Nguyen, Duc Trong Quach, Dao Thi-Hong Pham, Nga Minh Cao, Uyen Thi-Hong Nguyen, An Nguyen-Thanh Dang, Minh Anh Tran, Loc Huu Quach, Khiem Thien Tran and 7 more

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Antibiotic resistance and associated gene mutations ofFrontiers in cellular and infection microbiology · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Overcoming antibiotic-resistantWorld journal of gastroenterology · 2025
    Review
  6. Emergence of amoxicillin resistance in refractoryTherapeutic advances in gastroenterology · 2025
    Article
  7. Review
  8. Epidemiology ofAntibiotics (Basel, Switzerland) · 2023
    Review
  9. International journal of molecular sciences · 2023
    Review
  10. Novel Mutations Conferring Amoxicillin Resistance inAntibiotics (Basel, Switzerland) · 2023
    Article
  11. Review
  12. Evolution ofAntibiotics (Basel, Switzerland) · 2023
    Review
  13. Review
  14. Antibiotic Resistance ofMedicina (Kaunas, Lithuania) · 2022
    Article
  15. Multidrug-ResistantAntibiotics (Basel, Switzerland) · 2022
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Trung Thien TranDepartment of Surgery, University of Medicine and Pharmacy at Ho Chi Minh City, Ho Chi Minh City, Vietnam.
Anh Tuan NguyenMolecular Biomedical Center, University Medical Center, Ho Chi Minh City, Vietnam. anh.nt@umc.edu.vn.
Duc Trong QuachDepartment of Internal Medicine, University of Medicine and Pharmacy at Ho Chi Minh City, Ho Chi Minh City, Vietnam.
Dao Thi-Hong PhamDepartment of Genetics, University of Science, Vietnam National University Ho Chi Minh, Ho Chi Minh City, Vietnam.
Nga Minh CaoDepartment of Microbiology-Parasitology, University of Medicine and Pharmacy at Ho Chi Minh City, Ho Chi Minh City, Vietnam.
Uyen Thi-Hong NguyenDepartment of Genetics, University of Science, Vietnam National University Ho Chi Minh, Ho Chi Minh City, Vietnam.
An Nguyen-Thanh DangDepartment of Genetics, University of Science, Vietnam National University Ho Chi Minh, Ho Chi Minh City, Vietnam.
Minh Anh TranDepartment of Surgery, University of Medicine and Pharmacy at Ho Chi Minh City, Ho Chi Minh City, Vietnam.
Loc Huu QuachUniversity Medical Center - Campus 2, Ho Chi Minh City, Vietnam.
Khiem Thien TranUniversity Medical Center - Campus 2, Ho Chi Minh City, Vietnam.
Nhan Quang LeDepartment of Endoscopy, University Medical Center, Ho Chi Minh City, Vietnam.
Viet Van UngDepartment of Endoscopy, University Medical Center, Ho Chi Minh City, Vietnam.
Minh Ngoc-Quoc VoDepartment of Endoscopy, University Medical Center, Ho Chi Minh City, Vietnam.
Danh Thanh NguyenMolecular Biomedical Center, University Medical Center, Ho Chi Minh City, Vietnam.
Kha Dong NgoMolecular Biomedical Center, University Medical Center, Ho Chi Minh City, Vietnam.
Trung Le TranDepartment of Oral Biology, Yonsei University College of Density, Seoul, South Korea.
Vy Thuy NguyenDepartment of Genetics, University of Science, Vietnam National University Ho Chi Minh, Ho Chi Minh City, Vietnam.
University Medical Center HCMC · VNHo Chi Minh City Medicine and Pharmacy University · VNVietnam National University Ho Chi Minh City · VNYonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAmoxicillin-resistant Helicobacter pylori (H. pylori) strains seem to have increased over time in Vietnam. This threatens the effectiveness of H. pylori eradication therapies with this antibiotic. This study aimed to investigate the prevalence of primary resistance of H. pylori to amoxicillin and to assess its association with pbp1A point mutations in Vietnamese patients. MATERIALS AND

methodsNaive patients who presented with dyspepsia undergoing upper gastrointestinal endoscopy were recruited. Rapid urease tests and PCR assays were used to diagnose H. pylori infection. Amoxicillin susceptibility was examined by E-tests. Molecular detection of the mutant pbp1A gene conferring amoxicillin resistance was carried out by real-time PCR followed by direct sequencing of the PCR products. Phylogenetic analyses were performed using the Tamura-Nei genetic distance model and the neighbor-joining tree building method.

resultsThere were 308 patients (46.1% men and 53.9% women, p = 0.190) with H. pylori infection. The mean age of the patients was 40.5 ± 11.4 years, ranging from 18 to 74 years old. The E-test was used to determine the susceptibility to amoxicillin (minimum inhibitory concentration (MIC) ≤ 0.125 μg/ml) in 101 isolates, among which the rate of primarily resistant strains to amoxicillin was 25.7%. Then, 270 sequences of pbp1A gene fragments were analysed. There were 77 amino acid substitution positions investigated, spanning amino acids 310-596, with the proportion varying from 0.4 to 100%. Seven amino acid changes were significantly different between amoxicillin-sensitive (Amox

conclusionsWe reported the emergence of amoxicillin-resistant Helicobacter pylori strains in Vietnam and new mutations statistically associated with this antimicrobial resistance. Additional studies are necessary to identify the mechanisms contributing to this resistance in Vietnam.

Indexed as

AdolescentAdultAgedAmino Acid SubstitutionAmoxicillinAnti-Bacterial AgentsBacterial ProteinsDrug ResistanceFemaleGastrointestinal TractHelicobacter InfectionsHelicobacter pyloriHumansMaleMicrobial Sensitivity TestsMiddle AgedAmoxicillinAnti-Bacterial AgentsBacterial ProteinsPenicillin-Binding ProteinsAmoxicillin resistanceHelicobacter pyloriMutationpbp1A gene, Vietnam

Identifiers

PMID35114945
PMCPMC8812189
OpenAlexW4225922619

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.