Evidence map›Paper›PMID 35113480›Full record

ArticleCurrent protocols2022

RiPCA: An Assay for the Detection of RNA-Protein Interactions in Live Cells.

Sydney L Rosenblum, Amanda L Garner

Abstract read
In one paragraph

Article in Current protocols, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. CRISPR RiPCA for Investigating eIF4E-mACS chemical biology · 2025
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Optimization of RiPCA for the Live-Cell Detection of Pre-MicroRNA-Protein Interactions.Chembiochem : a European journal of chemical biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sydney L RosenblumProgram in Chemical Biology, University of Michigan, Ann Arbor, Michigan.
Amanda L GarnerProgram in Chemical Biology, University of Michigan, Ann Arbor, Michigan.

Funding

Chemical Biology Approach for Validating and Manipulating Cellular RNA-Protein InteractionsR01GM135252 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GARNER, AMANDA · 2019 to 2022
$1.4M
NIGMS NIH HHS R01 GM135252
6 · The paper itself

Abstract

Increasing interest in studying and modulating the interactions between RNAs and their RNA-binding proteins has indicated the need for enabling technologies. Existing means of detecting RNA-protein interactions (RPIs) are often limited to biochemical or post-lysis methods or cell-based methods that require the addition of an RNA-based affinity tag, such as the MS2 hairpin, precluding them from use in detecting small or highly processed RNAs. Taking advantage of bioorthogonal chemistry- and split-luciferase-based technologies, we developed an assay for the detection of RPIs in live cells. This article details the protocol and design considerations for RiPCA, or RNA interaction with Protein-mediated Complementation Assay. © 2022 Wiley Periodicals LLC.

Indexed as

Biological AssayRNALuciferasesRNA-Binding ProteinsLuciferasesRNARNA-Binding Proteinscellular assayprotein complementation assayRNARNA-binding proteinRNA-protein interaction

Identifiers

PMID35113480
PMCPMC8852372

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.