Evidence map›Paper›PMID 35112482›Full record

ArticleChemMedChem2022

Synthesis of Dihydrobenzofuro[3,2-b]chromenes as Potential 3CLpro Inhibitors of SARS-CoV-2: A Molecular Docking and Molecular Dynamics Study.

Sudip Gorai, Vivek Junghare, Kshama Kundu, Sowmomita Gharui, Mukesh Kumar, Birija Sankar Patro, Sandip K Nayak, Saugata Hazra, Soumyaditya Mula

Abstract read
In one paragraph

Article in ChemMedChem, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  5. Design, Synthesis and Biological Exploration of NovelInternational journal of molecular sciences · 2024
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  7. Potential Antidiabetic Activity of β-sitosterol fromCombinatorial chemistry & high throughput screening · 2024
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  8. Review
  9. Article
  10. Article
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  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sudip GoraiBio-Organic Division, Bhabha Atomic Research Centre, Mumbai, 400085, India.ORCID 0000-0001-5464-132X
Vivek JunghareDepartment of Biotechnology, Centre for Nanotechnology, Indian Institute of Technology Roorkee (IITR), Roorkee, Uttarakhand, India.
Kshama KunduBio-Organic Division, Bhabha Atomic Research Centre, Mumbai, 400085, India.ORCID 0000-0002-1606-2594
Sowmomita GharuiPondicherry University, Puducherry, 605 014, India.
Mukesh KumarHomi Bhabha National Institute Anushakti Nagar, Mumbai, 400094, India.
Birija Sankar PatroBio-Organic Division, Bhabha Atomic Research Centre, Mumbai, 400085, India.ORCID 0000-0001-9161-5913
Sandip K NayakBio-Organic Division, Bhabha Atomic Research Centre, Mumbai, 400085, India.
Saugata HazraDepartment of Biotechnology, Centre for Nanotechnology, Indian Institute of Technology Roorkee (IITR), Roorkee, Uttarakhand, India.
Soumyaditya MulaBio-Organic Division, Bhabha Atomic Research Centre, Mumbai, 400085, India.ORCID 0000-0001-5970-1184

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recent emergence of pandemic of coronavirus (COVID-19) caused by SARS-CoV-2 has raised significant global health concerns. More importantly, there is no specific therapeutics currently available to combat against this deadly infection. The enzyme 3-chymotrypsin-like cysteine protease (3CLpro) is known to be essential for viral life cycle as it controls the coronavirus replication. 3CLpro could be a potential drug target as established before in the case of severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV). In the current study, we wanted to explore the potential of fused flavonoids as 3CLpro inhibitors. Fused flavonoids (5a,10a-dihydro-11H-benzofuro[3,2-b]chromene) are unexplored for their potential bioactivities due to their low natural occurrences. Their synthetic congeners are also rare due to unavailability of general synthetic methodology. Here we designed a simple strategy to synthesize 5a,10a-dihydro-11H-benzofuro[3,2-b]chromene skeleton and it's four novel derivatives. Our structural bioinformatics study clearly shows excellent potential of the synthesized compounds in comparison to experimentally validated inhibitor N3. Moreover, in-silico ADMET study displays excellent druggability and extremely low level of toxicity of the synthesized molecules. Further, for better understanding, the molecular dynamic approach was implemented to study the change in dynamicity after the compounds bind to the protein. A detailed investigation through clustering analysis and distance calculation gave us sound comprehensive data about their molecular interaction. In summary, we anticipate that the currently synthesized molecules could not only be a potential set of inhibitors against 3CLpro but also the insights acquired from the current study would be instrumental in further developing novel natural flavonoid based anti-COVID therapeutic spectrums.

Indexed as

COVID-19SARS-CoV-2Antiviral AgentsBenzopyransFlavonoidsHumansMolecular Docking SimulationMolecular Dynamics SimulationProtease InhibitorsAntiviral AgentsBenzopyransFlavonoidsProtease Inhibitors3CLpro inhibitorsfused flavonoidsmolecular dockingmolecular dynamics simulationSARS-CoV-2

Identifiers

PMID35112482
PMCPMC9015348

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.