Evidence map›Paper›PMID 35112409›Full record

ArticleHuman mutation2022

A novel nonsense variant in the NFE2L1 transcription factor in a patient with developmental delay, hypotonia, genital anomalies, and failure to thrive.

Julia M Wang, Daniel V Ho, Amy Kritzer, Jefferson Y Chan

Open access · hybridAbstract read
In one paragraph

Article in Human mutation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Julia M WangDepartment of Laboratory Medicine and Pathology, University of California, Irvine, Irvine, California, USA.
Daniel V HoDepartment of Laboratory Medicine and Pathology, University of California, Irvine, Irvine, California, USA.
Amy KritzerDivision of Genetics and Genomics, Boston Children Hospital, Boston, Massachusetts, USA.
Jefferson Y ChanDepartment of Laboratory Medicine and Pathology, University of California, Irvine, Irvine, California, USA.ORCID 0000-0003-3476-9056
University of California, Irvine · USBoston Children's Hospital · US

Funding

Nrf1-dependent regulation of cellular stress response your titleR01ES029481 · NIEHS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CHAN, JEFFERSON Y · 2019 to 2023
$1.8M
NIEHS NIH HHS R01 ES029481
6 · The paper itself

Abstract

The NFE2L1 transcription factor (also known as Nrf1 for nuclear factor erythroid 2-related factor-1) is a broadly expressed basic leucine zipper protein that performs a critical role in the cellular stress response pathway. Here, we identified a heterozygous nonsense mutation located in the last exon of the gene that terminates translation prematurely, resulting in the production of a truncated peptide devoid of the carboxyl-terminal region containing the DNA-binding and leucine-zipper dimerization interface of the protein. Variant derivatives were well expressed in vitro, and they inhibited the transactivation function of wild-type proteins in luciferase reporter assays. Our studies suggest that this dominant-negative effect of truncated variants is through the formation of inactive heterodimers with wild-type proteins preventing the expression of its target genes. These findings suggest the potential role of diminished NFE2L1 function as an explanation for the developmental delay, hypotonia, hypospadias, bifid scrotum, and failure to thrive observed in the patient.

Indexed as

Failure to ThriveMuscle HypotoniaGene Expression RegulationGenitaliaHumansMaleNF-E2-Related Factor 1Transcription FactorsNFE2L1 protein, humanNF-E2-Related Factor 1Transcription Factorsdominant negativeglobal developmental delayNFE2L1nonsense varianttranscription factor

Identifiers

PMID35112409
PMCPMC8960367
OpenAlexW4210599185

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.