Evidence map›Paper›PMID 35108401›Full record

ArticleEuropean journal of immunology2022

Structure-guided stabilization of pathogen-derived peptide-HLA-E complexes using non-natural amino acids conserves native TCR recognition.

Claire Barber, Victoria Arena De Souza, Rachel L Paterson, Magdalena Martin-Urdiroz, Nitha Charles Mulakkal, Velupillai Srikannathasan, Mary Connolly, Gwilym Phillips, Tein Foong-Leong, Robert Pengelly and 10 more

Open access · hybridAbstract read
In one paragraph

Article in European journal of immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  14. An HLA-E-targeted TCR bispecific molecule redirects T cell immunity against Mycobacterium tuberculosis.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Instability of the HLA-E peptidome of HIV presents a major barrier to therapeutic targeting.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Intracellular trafficking of HLA-E and its regulation.The Journal of experimental medicine · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 1 institution in 1 country.

Claire BarberImmunocore Ltd, Abingdon, Oxfordshire, UK.ORCID 0000-0001-9748-6665
Victoria Arena De SouzaImmunocore Ltd, Abingdon, Oxfordshire, UK.
Rachel L PatersonImmunocore Ltd, Abingdon, Oxfordshire, UK.
Magdalena Martin-UrdirozImmunocore Ltd, Abingdon, Oxfordshire, UK.
Nitha Charles MulakkalImmunocore Ltd, Abingdon, Oxfordshire, UK.
Velupillai SrikannathasanImmunocore Ltd, Abingdon, Oxfordshire, UK.
Mary ConnollyImmunocore Ltd, Abingdon, Oxfordshire, UK.
Gwilym PhillipsImmunocore Ltd, Abingdon, Oxfordshire, UK.
Tein Foong-LeongImmunocore Ltd, Abingdon, Oxfordshire, UK.
Robert PengellyImmunocore Ltd, Abingdon, Oxfordshire, UK.
Vijaykumar KaruppiahImmunocore Ltd, Abingdon, Oxfordshire, UK.
Tressan GrantImmunocore Ltd, Abingdon, Oxfordshire, UK.
Marcin DembekImmunocore Ltd, Abingdon, Oxfordshire, UK.
Anil VermaImmunocore Ltd, Abingdon, Oxfordshire, UK.
Dawn Gibbs-HoweImmunocore Ltd, Abingdon, Oxfordshire, UK.
Thomas H BlicherImmunocore Ltd, Abingdon, Oxfordshire, UK.
Andrew KnoxImmunocore Ltd, Abingdon, Oxfordshire, UK.
Ross A RobinsonImmunocore Ltd, Abingdon, Oxfordshire, UK.
David K ColeImmunocore Ltd, Abingdon, Oxfordshire, UK.ORCID 0000-0003-0028-9396
Sarah LeonardImmunocore Ltd, Abingdon, Oxfordshire, UK.
Immunocore (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nonpolymorphic class Ib molecule, HLA-E, primarily presents peptides from HLA class Ia leader peptides, providing an inhibitory signal to NK cells via CD94/NKG2 interactions. Although peptides of pathogenic origin can also be presented by HLA-E to T cells, the molecular basis underpinning their role in antigen surveillance is largely unknown. Here, we solved a co-complex crystal structure of a TCR with an HLA-E presented peptide (pHLA-E) from bacterial (Mycobacterium tuberculosis) origin, and the first TCR-pHLA-E complex with a noncanonically presented peptide from viral (HIV) origin. The structures provided a molecular foundation to develop a novel method to introduce cysteine traps using non-natural amino acid chemistry that stabilized pHLA-E complexes while maintaining native interface contacts between the TCRs and different pHLA-E complexes. These pHLA-E monomers could be used to isolate pHLA-E-specific T cells, with obvious utility for studying pHLA-E restricted T cells, and for the identification of putative therapeutic TCRs.

Indexed as

Amino AcidsHLA AntigensHistocompatibility Antigens Class IHLA-E AntigensPeptidesReceptors, Antigen, T-CellAmino AcidsHistocompatibility Antigens Class IHLA AntigensHLA-E AntigensPeptidesReceptors, Antigen, T-Cellcrystal structureHIVHLA-Enon-natural amino acidsTCR

Identifiers

PMID35108401
PMCPMC9306587
OpenAlexW4210525689

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.