Evidence map›Paper›PMID 35108089›Full record

ArticleApplied and environmental microbiology2022

Salmonella enterica Serovar Typhimurium Isolates from Wild Birds in the United States Represent Distinct Lineages Defined by Bird Type.

Yezhi Fu, Nkuchia M M'ikanatha, Jeffrey M Lorch, David S Blehert, Brenda Berlowski-Zier, Chris A Whitehouse, Shaoting Li, Xiangyu Deng, Jared C Smith, Nikki W Shariat and 2 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Applied and environmental microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Microorganisms · 2026
    Review
  2. Host adaptation inApplied and environmental microbiology · 2026
    Review
  3. Wild Birds Pose Unique Food Safety Threats in the US Southeast.Animals : an open access journal from MDPI · 2025
    Article
  4. Animals : an open access journal from MDPI · 2024
    Review
  5. Characterization of MLST-99Microbiology (Reading, England) · 2024
    Article
  6. Review
  7. Microorganisms · 2023
    Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yezhi FuDepartment of Food Science, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0002-0510-9190
Nkuchia M M'ikanathaPennsylvania Department of Healthgrid.280365.a, Harrisburg, Pennsylvania, USA.
Jeffrey M LorchU.S. Geological Survey, National Wildlife Health Center, Madison, Wisconsin, USA.ORCID 0000-0003-2239-1252
David S BlehertU.S. Geological Survey, National Wildlife Health Center, Madison, Wisconsin, USA.
Brenda Berlowski-ZierU.S. Geological Survey, National Wildlife Health Center, Madison, Wisconsin, USA.
Chris A WhitehouseCenter for Veterinary Medicine, U.S. Food and Drug Administration, Laurel, Maryland, USA.
Shaoting LiCenter for Food Safety, Department of Food Science and Technology, University of Georgiagrid.213876.9, Griffin, Georgia, USA.
Xiangyu DengCenter for Food Safety, Department of Food Science and Technology, University of Georgiagrid.213876.9, Griffin, Georgia, USA.ORCID 0000-0002-7251-2529
Jared C SmithDepartment of Population Health, Poultry Diagnostic and Research Center, University of Georgiagrid.213876.9, Athens, Georgia, USA.
Nikki W ShariatDepartment of Population Health, Poultry Diagnostic and Research Center, University of Georgiagrid.213876.9, Athens, Georgia, USA.ORCID 0000-0003-3943-4829
Erin M NawrockiDepartment of Food Science, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0002-7610-7117
Edward G DudleyDepartment of Food Science, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0003-1298-1603

Funding

Pennsylvania Surveillance for Antimicrobial Resistant-enteric Bacteria in Retail FoodU01FD007142 · FDA · PENNSYLVANIA STATE DEPT OF HEALTH · PI NKUCHIA MUGAMBI M'IKANATHA · 2020 to 2026
$1.2M
Genome Sequencing of Foodborne Pathogens by the Pennsylvania GenomeTrakr GroupU19FD007114 · FDA · PENNSYLVANIA STATE UNIVERSITY, THE · PI DUDLEY, EDWARD G. · 2020 to 2024
$1.1M
Pennsylvania Retail Meat Program - Collaboration with FDA National Antimicrobial Resistance Monitoring Systems (NARMS)U01FD006253 · FDA · PENNSYLVANIA STATE DEPT OF HEALTH · PI M'IKANATHA, NKUCHIA MUGAMBI · 2017 to 2019
$389k
FDA HHS U01 FD006253FDA HHS U01 FD007142FDA HHS U19 FD007114HHS | U.S. Food and Drug Administration (FDA) 1U19FD007114-01
6 · The paper itself

Abstract

Salmonella enterica serovar Typhimurium is typically considered a host generalist; however, certain isolates are associated with specific hosts and show genetic features of host adaptation. Here, we sequenced 131

Indexed as

Bird DiseasesSalmonella entericaSalmonella Infections, AnimalAnimalsAnimals, WildSalmonella typhimuriumSerogroupUnited Stateshost adaptationmachine learningSalmonella Typhimuriumvirulence gene signatureswild birds

Identifiers

PMID35108089
PMCPMC8939312

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.