Evidence map›Paper›PMID 35107668›Full record

ArticleArchives of virology2022

Host range and molecular variability of the sadwavirus dioscorea mosaic associated virus.

Marie Umber, Denis Filloux, Laurence Svanella-Dumas, Lydiane Bonheur, Isabelle Acina-Mambole, Rose-Marie Gomez, Chantal Faure, Fabiola Anzala, Claudie Pavis, Philippe Roumagnac and 4 more

Abstract read
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In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Viruses of Yams (Viruses · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Marie UmberINRAE, UR1321 ASTRO Agrosystèmes tropicaux, 97170, Petit-Bourg, Guadeloupe, France.
Denis FillouxCIRAD, UMR PHIM, 34090, Montpellier, France.
Laurence Svanella-DumasUniv. Bordeaux, INRAE, UMR 1332 Biologie du Fruit et Pathologie, CS20032, 33882, Villenave d'Ornon Cedex, France.
Lydiane BonheurCIRAD, UMR AGAP Institut, Station de Neufchâteau, Sainte-Marie, 97130, Capesterre Belle-Eau, France.
Isabelle Acina-MamboleCIRAD, UMR AGAP Institut, Station de Neufchâteau, Sainte-Marie, 97130, Capesterre Belle-Eau, France.
Rose-Marie GomezINRAE, UR1321 ASTRO Agrosystèmes tropicaux, 97170, Petit-Bourg, Guadeloupe, France.
Chantal FaureUniv. Bordeaux, INRAE, UMR 1332 Biologie du Fruit et Pathologie, CS20032, 33882, Villenave d'Ornon Cedex, France.
Fabiola AnzalaINRAE, UR1321 ASTRO Agrosystèmes tropicaux, 97170, Petit-Bourg, Guadeloupe, France.
Claudie PavisINRAE, UR1321 ASTRO Agrosystèmes tropicaux, 97170, Petit-Bourg, Guadeloupe, France.
Philippe RoumagnacCIRAD, UMR PHIM, 34090, Montpellier, France.
Armelle MaraisUniv. Bordeaux, INRAE, UMR 1332 Biologie du Fruit et Pathologie, CS20032, 33882, Villenave d'Ornon Cedex, France.
Sébastien TheilUniv. Bordeaux, INRAE, UMR 1332 Biologie du Fruit et Pathologie, CS20032, 33882, Villenave d'Ornon Cedex, France.
Thierry CandresseUniv. Bordeaux, INRAE, UMR 1332 Biologie du Fruit et Pathologie, CS20032, 33882, Villenave d'Ornon Cedex, France.
Pierre-Yves TeycheneyCIRAD, UMR PVBMY, F-97410, Saint Pierre, La Réunion, France. teycheney@cirad.fr.ORCID http://orcid.org/0000-0002-9754-0745

Funding

ANR ANR-11-EBIM-0002-06Guadeloupe Region 2018-FED-1088Seventh Framework Programme 2018-FED-1088
6 · The paper itself

Abstract

Dioscorea mosaic associated virus (DMaV) is a member of the genus Sadwavirus, family Secoviridae, that is associated with mosaic symptoms in Dioscorea rotundata in Brazil. The genome of a DMaV isolate detected in D. trifida in Guadeloupe was sequenced by high-throughput sequencing. Using an RT-PCR-based detection assay, we found that DMaV infects D. alata, D. bulbifera, D. cayenensis-rotundata, D. esculenta, and D. trifida accessions conserved in Guadeloupe and Côte d'Ivoire and displays a very high level of molecular diversity in a relatively small region of the genome targeted by the assay. We also provide evidence that DMaV is also present in D. rotundata in Benin and in D. alata in Nigeria.

Indexed as

DioscoreaHost SpecificitySecoviridaeGenetic VariationPhylogeny

Identifiers

PMID35107668

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.