Evidence map›Paper›PMID 35107332›Full record

ArticleMicrobiology spectrum2022

Genomic Features and Pervasive Negative Selection in

Mu Peng, Dongyu Wang, Lauren M Lui, Torben Nielsen, Renmao Tian, Megan L Kempher, Xuanyu Tao, Chongle Pan, Romy Chakraborty, Adam M Deutschbauer and 7 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 34 citations in OpenAlex.

  1. Changes in Soil Bacteriobiome in Response to Organic Amendments and CdInternational journal of molecular sciences · 2026
    Article
  2. The complete genome of a copper-tolerant strain ofMicrobiology resource announcements · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Mu Peng *Institute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahomagrid.266900.b, Norman, Oklahoma, United States.
Dongyu Wang *Department of Microbiology and Plant Biology, University of Oklahomagrid.266900.b, Norman, Oklahoma, United States.
Lauren M LuiEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, United States.
Torben NielsenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, United States.
Renmao TianInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahomagrid.266900.b, Norman, Oklahoma, United States.
Megan L KempherInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahomagrid.266900.b, Norman, Oklahoma, United States.ORCID 0000-0003-2992-9625
Xuanyu TaoInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahomagrid.266900.b, Norman, Oklahoma, United States.
Chongle PanDepartment of Microbiology and Plant Biology, University of Oklahomagrid.266900.b, Norman, Oklahoma, United States.ORCID 0000-0003-2860-0334
Romy ChakrabortyEarth and Environmental Sciences Area, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, United States.ORCID 0000-0001-9326-554X
Adam M DeutschbauerEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, United States.
Michael P ThorgersenDepartment of Biochemistry and Molecular Biology, University of Georgiagrid.213876.9, Athens, Georgia, United States.
Michael W W AdamsDepartment of Biochemistry and Molecular Biology, University of Georgiagrid.213876.9, Athens, Georgia, United States.ORCID 0000-0002-9796-5014
Matthew W FieldsDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana, United States.
Terry C HazenDepartment of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee, United States.ORCID 0000-0002-2536-9993
Adam P ArkinEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratorygrid.184769.5, Berkeley, California, United States.
Aifen ZhouInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahomagrid.266900.b, Norman, Oklahoma, United States.ORCID 0000-0003-3019-5649
Jizhong ZhouInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahomagrid.266900.b, Norman, Oklahoma, United States.
University of Oklahoma · USLawrence Berkeley National Laboratory · USUniversity of Georgia · USMontana State University · USOak Ridge National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Base CompositionGammaproteobacteriaGene Transfer, HorizontalGenome, BacterialGenome SizeGenomic IslandsGenomicsGroundwaterMetals, HeavyNitratesPhylogenyWater Pollutants, ChemicalMetals, HeavyNitratesWater Pollutants, Chemicalcomparative genomicshorizontal gene transfermethylationnegative selectionrestriction-modification system genesRhodanobacter

Identifiers

PMID35107332
PMCPMC8809349
OpenAlexW4210382331

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.