Evidence map›Paper›PMID 35106705›Full record

ArticleFolia microbiologica2022

A highly efficient stratagem for protoplast isolation and genetic transformation in filamentous fungus Colletotrichum falcatum.

Dharmaraj Amalamol, N M R Ashwin, Kana Valiyaveettil Lakshana, M Nirmal Bharathi, Amalraj Ramesh Sundar, Rajeev K Sukumaran, Palaniyandi Malathi, Rasappa Viswanathan

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Article in Folia microbiologica, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Establishment of the Genetic Transformation System ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. PEG-Mediated Protoplast Transformation ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  6. Article
  7. Comparative Genomic Analysis of Two Monokaryons ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  8. Tracking the infection dynamics ofFrontiers in plant science · 2025
    Article
  9. Article
  10. Development ofFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Dharmaraj AmalamolPlant Pathology Section, ICAR - Sugarcane Breeding Institute, Indian Council of Agricultural Research, Coimbatore, 641007, India.ORCID http://orcid.org/0000-0003-2699-6195
N M R AshwinPlant Pathology Section, ICAR - Sugarcane Breeding Institute, Indian Council of Agricultural Research, Coimbatore, 641007, India.ORCID http://orcid.org/0000-0003-3538-9645
Kana Valiyaveettil LakshanaPlant Pathology Section, ICAR - Sugarcane Breeding Institute, Indian Council of Agricultural Research, Coimbatore, 641007, India.ORCID http://orcid.org/0000-0003-3076-9868
M Nirmal BharathiPlant Pathology Section, ICAR - Sugarcane Breeding Institute, Indian Council of Agricultural Research, Coimbatore, 641007, India.
Amalraj Ramesh SundarPlant Pathology Section, ICAR - Sugarcane Breeding Institute, Indian Council of Agricultural Research, Coimbatore, 641007, India. rameshsundar_sbi@yahoo.co.in.ORCID http://orcid.org/0000-0001-7061-6976
Rajeev K SukumaranMicrobial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Trivandrum, India.ORCID http://orcid.org/0000-0002-1315-3650
Palaniyandi MalathiPlant Pathology Section, ICAR - Sugarcane Breeding Institute, Indian Council of Agricultural Research, Coimbatore, 641007, India.ORCID http://orcid.org/0000-0002-1123-2697
Rasappa ViswanathanPlant Pathology Section, ICAR - Sugarcane Breeding Institute, Indian Council of Agricultural Research, Coimbatore, 641007, India.ORCID http://orcid.org/0000-0002-7274-8144
Indian Council of Agricultural Research · INNational Institute for Interdisciplinary Science and Technology · IN

Funding

council of scientific and industrial research, india CSIR-UGC NET SRFcouncil of scientific and industrial research, india File no: 09/706(0002)/2017-EMR-Idepartment of biotechnology , ministry of science and technology, government of india BT/PR23621/BPA/118/297/2017
6 · The paper itself

Abstract

Red rot of sugarcane caused by the hemi-biotrophic fungal pathogen, Colletotrichum falcatum, is a major threat to sugarcane cultivation in many tropical countries such as India, Bangladesh, and Pakistan. With the accumulating information on pathogenicity determinants, namely, effectors and pathogen-associated molecular patterns (PAMPs) of C. falcatum, it is of paramount importance to decipher the functional role of these molecular players that may ultimately decide upon the outcome of sugarcane-C. falcatum interaction. Since C. falcatum is a multinucleated filamentous fungus, the conventional Agrobacterium-mediated transformation method could not be effectively utilized for targeted manipulation of genomic DNA. Hence, we developed a highly efficient protoplast-based transformation method for the virulent pathotype of C. falcatum - Cf671, which involves isolation of protoplast, polyethylene glycol (PEG)-mediated transformation, and regeneration of transformed protoplasts into hyphal colonies. In this study, germinating conidiospores of Cf671 were treated with different enzyme-osmoticum combinations, out of which 20 mg/mL lysing enzyme with 5 mg/mL β-glucanase in an osmoticum of 1.2 mol/L MgSO

Indexed as

ColletotrichumSaccharumProtoplastsTransformation, Genetic

Identifiers

PMID35106705
OpenAlexW4210528750

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.