Evidence map›Paper›PMID 35106498›Full record

ArticleSTAR protocols2022

Immunoprecipitation and Western blot-based detection of protein O-GlcNAcylation in cells.

Oumaima Ahmed, Malik Affar, Louis Masclef, Mohamed Echbicheb, Mila Gushul-Leclaire, Benjamin Estavoyer, David J Vocadlo, El Bachir Affar

Open access · goldAbstract read
In one paragraph

Article in STAR protocols, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. CanPharmaceuticals (Basel, Switzerland) · 2024
    Review
  3. In Vitro Inhibitory and Proliferative Cellular Effects of Different Extracts ofEvidence-based complementary and alternative medicine : eCAM · 2022
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Oumaima AhmedMaisonneuve-Rosemont Hospital Research Center and Department of Medicine, University of Montréal, Montréal, QC H3C 3J7, Canada.
Malik AffarMaisonneuve-Rosemont Hospital Research Center and Department of Medicine, University of Montréal, Montréal, QC H3C 3J7, Canada.
Louis MasclefMaisonneuve-Rosemont Hospital Research Center and Department of Medicine, University of Montréal, Montréal, QC H3C 3J7, Canada.
Mohamed EchbichebMaisonneuve-Rosemont Hospital Research Center and Department of Medicine, University of Montréal, Montréal, QC H3C 3J7, Canada.
Mila Gushul-LeclaireMaisonneuve-Rosemont Hospital Research Center and Department of Medicine, University of Montréal, Montréal, QC H3C 3J7, Canada.
Benjamin EstavoyerMaisonneuve-Rosemont Hospital Research Center and Department of Medicine, University of Montréal, Montréal, QC H3C 3J7, Canada.
David J VocadloDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.
El Bachir AffarMaisonneuve-Rosemont Hospital Research Center and Department of Medicine, University of Montréal, Montréal, QC H3C 3J7, Canada.
Hôpital Maisonneuve-Rosemont · CASimon Fraser University · CA

Funding

CIHR
6 · The paper itself

Abstract

Detection of protein O-GlcNAcylation could be challenging. By using the host-cell factor 1 (HCF-1), a known O-GlcNAcylated protein, we immunoprecipitated HCF-1 from transfected HEK293T cells or endogenous HCF-1 from HeLa cells to detect its O-GlcNAc levels by Western blotting. We also take advantage of RNAi or chemical inhibitors to modulate OGT and OGA activities before HCF-1 immunoprecipitation. For complete details on the use and execution of this protocol, please refer to Daou et al. (2011).

Indexed as

N-AcetylglucosaminyltransferasesBlotting, WesternHEK293 CellsHeLa CellsHumansImmunoprecipitationN-AcetylglucosaminyltransferasesCell BiologyMolecular BiologyProtein Biochemistry

Identifiers

PMID35106498
PMCPMC8784402
OpenAlexW4206547853

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.