Evidence map›Paper›PMID 35105377›Full record

ArticleMicrobiome2022

Comparative metabolomic analysis reveals shared and unique chemical interactions in sponge holobionts.

Shan Zhang, Weizhi Song, Louis-Félix Nothias, Sneha P Couvillion, Nicole Webster, Torsten Thomas

Abstract readVideo-Audio Media
In one paragraph

Article in Microbiome, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
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  8. Article
  9. Marine drugs · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shan ZhangSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, 2052, Australia.
Weizhi SongCentre for Marine Science and Innovation, University of New South Wales, Sydney, 2052, Australia.
Louis-Félix NothiasSchool of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.
Sneha P CouvillionBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA.
Nicole WebsterAustralian Institute of Marine Science, Townsville, Australia.
Torsten ThomasCentre for Marine Science and Innovation, University of New South Wales, Sydney, 2052, Australia. t.thomas@unsw.edu.au.ORCID 0000-0001-9557-3001

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSponges are ancient sessile metazoans, which form with their associated microbial symbionts a complex functional unit called a holobiont. Sponges are a rich source of chemical diversity; however, there is limited knowledge of which holobiont members produce certain metabolites and how they may contribute to chemical interactions. To address this issue, we applied non-targeted liquid chromatography tandem mass spectrometry (LC-MS/MS) and gas chromatography mass spectrometry (GC-MS) to either whole sponge tissue or fractionated microbial cells from six different, co-occurring sponge species.

resultsSeveral metabolites were commonly found or enriched in whole sponge tissue, supporting the notion that sponge cells produce them. These include 2-methylbutyryl-carnitine, hexanoyl-carnitine and various carbohydrates, which may be potential food sources for microorganisms, as well as the antagonistic compounds hymenialdisine and eicosatrienoic acid methyl ester. Metabolites that were mostly observed or enriched in microbial cells include the antioxidant didodecyl 3,3'-thiodipropionate, the antagonistic compounds docosatetraenoic acid, and immune-suppressor phenylethylamide. This suggests that these compounds are mainly produced by the microbial members in the sponge holobiont, and are potentially either involved in inter-microbial competitions or in defenses against intruding organisms.

conclusionsThis study shows how different chemical functionality is compartmentalized between sponge hosts and their microbial symbionts and provides new insights into how chemical interactions underpin the function of sponge holobionts. Video abstract.

Indexed as

MetabolomicsTandem Mass SpectrometryChromatography, LiquidAntagonistAntioxidantsMetabolomicsSpongeSymbionts

Identifiers

PMID35105377
PMCPMC8805237

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.