Evidence map›Paper›PMID 35104026›Full record

ArticleMolecular ecology2022

Host genetics, phenotype and geography structure the microbiome of a foundational seaweed.

Georgina Wood, Peter D Steinberg, Alexandra H Campbell, Adriana Vergés, Melinda A Coleman, Ezequiel M Marzinelli

Open access · hybridAbstract read
In one paragraph

Article in Molecular ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Georgina WoodSchool of Life and Environmental Sciences, The University of Sydney, Sydney, New South Wales, Australia.ORCID 0000-0003-3855-0932
Peter D SteinbergCentre for Marine Science and Innovation, School of Biological, Earth and Environmental Sciences, UNSW Sydney, Sydney, New South Wales, Australia.
Alexandra H CampbellUSC Seaweed Research Group, University of the Sunshine Coast, Sunshine Coast, Queensland, Australia.ORCID 0000-0002-2322-2840
Adriana VergésCentre for Marine Science and Innovation, School of Biological, Earth and Environmental Sciences, UNSW Sydney, Sydney, New South Wales, Australia.ORCID 0000-0002-3507-1234
Melinda A ColemanDepartment of Primary Industries, National Marine Science Centre, Coffs Harbour, New South Wales, Australia.ORCID 0000-0003-2623-633X
Ezequiel M MarzinelliSchool of Life and Environmental Sciences, The University of Sydney, Sydney, New South Wales, Australia.ORCID 0000-0002-3762-3389
The University of Sydney · AUNanyang Technological University · SGNew South Wales Department of Primary Industries · AUUniversity of the Sunshine Coast · AUUNSW Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interactions between hosts and their microbiota are vital to the functioning and resilience of macro-organisms. Critically, for hosts that play foundational roles in communities, understanding what drives host-microbiota interactions is essential for informing ecosystem restoration and conservation. We investigated the relative influence of host traits and the surrounding environment on microbial communities associated with the foundational seaweed Phyllospora comosa. We quantified 16 morphological and functional phenotypic traits, including host genetics (using 354 single nucleotide polymorphisms) and surface-associated microbial communities (using 16S rRNA gene amplicon sequencing) from 160 individuals sampled from eight sites spanning Phyllospora's entire latitudinal distribution (1,300 km). Combined, these factors explained 54% of the overall variation in Phyllospora's associated microbial community structure, much of which was related to the local environment (~32%). We found that putative "core" microbial taxa (i.e., present on all Phyllospora individuals sampled) exhibited slightly higher associations with host traits when compared to "variable" taxa (not present on all individuals). We identified several key genetic loci and phenotypic traits in Phyllospora that were strongly related to multiple microbial amplicon sequence variants, including taxa with known associations to seaweed defence, disease and tissue degradation. This information on how host-associated microbial communities vary with host traits and the environment enhances our current understanding of how "holobionts" (hosts plus their microbiota) are structured. Such understanding can be used to inform management strategies of these important and vulnerable habitats.

Indexed as

MicrobiotaPhaeophyceaeSeaweedGeographyPhenotypeRNA, Ribosomal, 16SRNA, Ribosomal, 16Sgeneticsholobiontkelpmacroalgamarine ecologyphenotype

Identifiers

PMID35104026
PMCPMC9540321
OpenAlexW4210586982

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.