Evidence map›Paper›PMID 35103850›Full record

ArticleHistory and philosophy of the life sciences2022

Practicing virology: making and knowing a mid-twentieth century experiment with Tobacco mosaic virus.

Karen-Beth G Scholthof, Lorenzo J Washington, April DeMell, Maria R Mendoza, Will B Cody

Open access · hybridAbstract read
In one paragraph

Article in History and philosophy of the life sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Karen-Beth G ScholthofPlant Pathology and Microbiology, Texas A&M University, College Station, TX, 77843-2132, USA. kbgs@tamu.edu.ORCID 0000-0002-8169-9823
Lorenzo J WashingtonPlant and Microbial Biology, University of California, Berkeley, CA, USA.ORCID 0000-0002-0624-4693
April DeMellPlant Biology, University of California, Davis, CA, USA.ORCID 0000-0001-8345-075X
Maria R MendozaFujiFilm Diosynth Biotechnologies, College Station, TX, USA.
Will B CodyChemical Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-8894-5580
Stanford University · USTexas A&M University · USUniversity of California, Berkeley · USUniversity of California, Davis · US

Funding

Directorate for Social, Behavioral and Economic Sciences 1456878
6 · The paper itself

Abstract

Tobacco mosaic virus (TMV) has served as a model organism for pathbreaking work in plant pathology, virology, biochemistry and applied genetics for more than a century. We were intrigued by a photograph published in Phytopathology in 1934 showing that Tabasco pepper plants responded to TMV infection with localized necrotic lesions, followed by abscission of the inoculated leaves. This dramatic outcome of a biological response to infection observed by Francis O. Holmes, a virologist at the Rockefeller Institute for Medical Research, was used to score plants for resistance to TMV infection. Our objective was to gain a better understanding of early to mid-twentieth century ideas of genetic resistance to viruses in crop plants. We investigated Holmes' observation as a practical exercise in reworking an experiment, having been inspired by Pamela Smith's innovative Making and Knowing Project. We had a great deal of difficulty replicating Holmes' experiment, finding that biological materials and experimental customs change over time, in ways that ideas do not. Using complementary tools plus careful study and interpretation of the original text and figures, we were able to rework, yet only partially replicate, this experiment. Reading peer-reviewed manuscripts that cited Holmes' 1934 report provided an additional level of insight into the interpretation and replication of this work in the decades that followed. From this, we touch on how experimental reworking can inform our strategies to address the reproducibility "crisis" in twenty-first century science.

Indexed as

Tobacco Mosaic VirusNicotianaPlantsReproducibility of ResultsComplementary scienceHistory of sciencePlant geneticsPlant pathologyReproducibility in scienceScience and experimentationTobacco mosaic virus

Identifiers

PMID35103850
PMCPMC8805432
OpenAlexW4210772299

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.