Evidence map›Paper›PMID 35102889›Full record

ArticleActa crystallographica. Section D, Structural biology2022

Determining the oxidation state of elements by X-ray crystallography.

Frank Lennartz, Jae Hun Jeoung, Stefan Ruenger, Holger Dobbek, Manfred S Weiss

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. OAngewandte Chemie (International ed. in English) · 2026
    Article
  2. Electronic and Structural Heterogeneity in the Diiron Center of Sulerythrin: Insights From Hybrid QM/MM Calculations.Chemphyschem : a European journal of chemical physics and physical chemistry · 2026
    Article
  3. bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Utilizing anomalous signals for element identification in macromolecular crystallography.Acta crystallographica. Section D, Structural biology · 2024
    Article
  6. Article
  7. A database overview of metal-coordination distances in metalloproteins.Acta crystallographica. Section D, Structural biology · 2024
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Frank LennartzMacromolecular Crystallography, Helmholtz-Zentrum Berlin, Albert-Einstein-Strasse 15, 12489 Berlin, Germany.
Jae Hun JeoungDepartment of Biology, Humboldt-Universität zu Berlin, 10099 Berlin, Germany.
Stefan RuengerDepartment of Biology, Humboldt-Universität zu Berlin, 10099 Berlin, Germany.
Holger DobbekDepartment of Biology, Humboldt-Universität zu Berlin, 10099 Berlin, Germany.
Manfred S WeissMacromolecular Crystallography, Helmholtz-Zentrum Berlin, Albert-Einstein-Strasse 15, 12489 Berlin, Germany.ORCID 0000-0002-2362-7047
Humboldt-Universität zu Berlin · DEHelmholtz-Zentrum Berlin für Materialien und Energie · DE

Funding

Deutsche Forschungsgemeinschaft 390540038
6 · The paper itself

Abstract

Protein-mediated redox reactions play a critical role in many biological processes and often occur at centres that contain metal ions as cofactors. In order to understand the exact mechanisms behind these reactions it is important to not only characterize the three-dimensional structures of these proteins and their cofactors, but also to identify the oxidation states of the cofactors involved and to correlate this knowledge with structural information. The only suitable approach for this based on crystallographic measurements is spatially resolved anomalous dispersion (SpReAD) refinement, a method that has been used previously to determine the redox states of metals in iron-sulfur cluster-containing proteins. In this article, the feasibility of this approach for small, non-iron-sulfur redox centres is demonstrated by employing SpReAD analysis to characterize Sulfolobus tokodaii sulerythrin, a ruberythrin-like protein that contains a binuclear metal centre. Differences in oxidation states between the individual iron ions of the binuclear metal centre are revealed in sulerythrin crystals treated with H

Indexed as

Iron-Sulfur ProteinsMetalloproteinsCrystallography, X-RayHydrogen PeroxideOxidation-ReductionHydrogen PeroxideIron-Sulfur ProteinsMetalloproteinsmetalloproteinsoxidoreductasesphotoreductionradiation damageredox reactionsspatially resolved anomalous dispersion refinementSpReADsulerythrin

Identifiers

PMID35102889
PMCPMC8805299
OpenAlexW4206964617

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.