Evidence map›Paper›PMID 35102730›Full record

ArticleJournal of biomedical optics2022

Fluid mechanics approach to analyzing collagen fiber organization.

Adriana C Salazar Coariti, Maurice S Fabien, Johnny Guzman, Jeffrey A McGuire, Raffaella De Vita, Kimani C Toussaint

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Glycosaminoglycans modulate long-range mechanical communication between cells in collagen networks.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Adriana C Salazar CoaritiBrown University, PROBE Lab, School of Engineering, Providence, Rhode Island, United States.
Maurice S FabienBrown University, Division of Applied Mathematics, Providence, Rhode Island, United States.
Johnny GuzmanBrown University, Division of Applied Mathematics, Providence, Rhode Island, United States.
Jeffrey A McGuireVirginia Tech, Soft Tissue Research: Experiments, Theory, and Computations by Hokies (STRETCH) Lab,, United States.
Raffaella De VitaVirginia Tech, Soft Tissue Research: Experiments, Theory, and Computations by Hokies (STRETCH) Lab,, United States.
Kimani C ToussaintBrown University, PROBE Lab, School of Engineering, Providence, Rhode Island, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

significanceThe spatial organization of collagen fibers has been used as a biomarker for assessing injury and disease progression. However, quantifying this organization for complex structures is challenging.

aimTo quantify and classify complex collagen fiber organizations. APPROACH: Using quantitative second-harmonic generation (SHG) microscopy, we show that collagen-fiber orientation can be viewed as pseudovector fields. Subsequently, we analyze them using fluid mechanic metrics, such as energy U, enstrophy E, and tortuosity τ.

resultsWe show that metrics used in fluid mechanics for analyzing fluid flow can be adapted to analyze complex collagen fiber organization. As examples, we consider SHG images of collagenous tissue for straight, wavy, and circular fiber structures.

conclusionsThe results of this study show the utility of the chosen metrics to distinguish diverse and complex collagen organizations. We find that the distribution of values for E and U increases with collagen fiber disorganization, where they divide between low and high values corresponding to uniformly aligned fibers and disorganized collagen fibers, respectively. We also confirm that the values of τ cluster around 1 when the fibers are straight, and the range increases up to 1.5 when wavier fibers are present.

Indexed as

CollagenExtracellular MatrixSkinCollagencollagenfluid mechanicssecond-harmonic generationvector fieldswaviness

Identifiers

PMID35102730
PMCPMC8802803

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.