Evidence map›Paper›PMID 35102727›Full record

ArticleJournal of biomedical optics2022

Using Fourier ptychography microscopy to achieve high-resolution chromosome imaging: an initial evaluation.

Ke Zhang, Xianglan Lu, Xuxin Chen, Roy Zhang, Kar-Ming Fung, Hong Liu, Bin Zheng, Shibo Li, Yuchen Qiu

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ke ZhangUniversity of Oklahoma, Stephenson School of Biomedical Engineering, Norman, Oklahoma, United States.
Xianglan LuUniversity of Oklahoma Health Sciences Center, Department of Pediatrics, Norman, Oklahoma City, Okla, United States.
Xuxin ChenUniversity of Oklahoma, School of Electrical and Computer Engineering, Norman, Oklahoma, United States.
Roy ZhangUniversity of Oklahoma Health Sciences Center, Department of Pathology, Norman, Oklahoma City, Oklah, United States.
Kar-Ming FungUniversity of Oklahoma Health Sciences Center, Department of Pathology, Norman, Oklahoma City, Oklah, United States.
Hong LiuUniversity of Oklahoma, School of Electrical and Computer Engineering, Norman, Oklahoma, United States.
Bin ZhengUniversity of Oklahoma, School of Electrical and Computer Engineering, Norman, Oklahoma, United States.
Shibo LiUniversity of Oklahoma Health Sciences Center, Department of Pediatrics, Norman, Oklahoma City, Okla, United States.
Yuchen QiuUniversity of Oklahoma, Stephenson School of Biomedical Engineering, Norman, Oklahoma, United States.

Funding

Tracking and Evaluation CoreU54GM104938 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI PAUL G SPICER · 2013 to 2026
$68.2M
Tissue Pathology Shared ResourceP30CA225520 · NCI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Michael S. Businelle · 2018 to 2026
$27.1M
NCI NIH HHS P30 CA225520NIGMS NIH HHS U54 GM104938
6 · The paper itself

Abstract

significanceSearching analyzable metaphase chromosomes is a critical step for the diagnosis and treatment of leukemia patients, and the searching efficiency is limited by the difficulty that the conventional microscopic systems have in simultaneously achieving high resolution and a large field of view (FOV). However, this challenge can be addressed by Fourier ptychography microscopy (FPM) technology.

aimThe purpose of this study is to investigate the feasibility of utilizing FPM to reconstruct high-resolution chromosome images. APPROACH: An experimental FPM prototype, which was equipped with 4  ×    /  0.1  NA or 10  ×    /  0.25  NA objective lenses to achieve a theoretical equivalent NA of 0.48 and 0.63, respectively, was developed. Under these configurations, we first generated the system modulation transfer function (MTF) curves to assess the resolving power. Next, a group of analyzable metaphase chromosomes were imaged by the FPM system, which were acquired from the peripheral blood samples of the leukemia patients. The chromosome feature qualities were evaluated and compared with the results accomplished by the corresponding conventional microscopes.

resultsThe MTF curve results indicate that the resolving power of the 4  ×    /  0.1  NA FPM system is equivalent and comparable to the 20  ×    /  0.4  NA conventional microscope, whereas the performance of the 10  ×    /  0.25  NA FPM system is close to the 60  ×    /  0.95  NA conventional microscope. When imaging the chromosomes, the feature qualities of the 4  ×    /  0.1  NA FPM system are comparable to the results under the conventional 20  ×    /  0.4  NA lens, whereas the feature qualities of the 10  ×    /  0.25  NA FPM system are better than the conventional 60  ×    /  0.95  NA lens and comparable to the conventional 100  ×    /  1.25  NA lens.

conclusionsThis study initially verified that it is feasible to utilize FPM to develop a high-resolution and wide-field chromosome sample scanner.

Indexed as

LensesMicroscopyChromosomesFourier AnalysisHumansanalyzable metaphase chromosomeFourier ptychography microscopyhigh throughput scanningleukemia diagnosis

Identifiers

PMID35102727
PMCPMC8802907

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.