Evidence map›Paper›PMID 35102169›Full record

ArticleScientific reports2022

Dried blood spot sampling for hepatitis B virus quantification, sequencing and mutation detection.

Cristianne Sousa Bezerra, Moyra Machado Portilho, Jakeline Ribeiro Barbosa, Carolina Pimentel de Azevedo, Ana Carolina da Fonseca Mendonça, José Napoleão Monte da Cruz, Cristiane Cunha Frota, Bárbara Vieira do Lago, Lívia Melo Villar

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Virological markers for clinical trials in chronic viral hepatitis.JHEP reports : innovation in hepatology · 2024
    Review
  6. Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Cristianne Sousa BezerraLaboratorio de Hepatites Virais, Instituto Oswaldo Cruz, Helio and Peggy Pereira Pavillion - Ground Floor - Room B09, Fundação Oswaldo Cruz, FIOCRUZ, Av. Brasil, 4365 - Manguinhos, Rio de Janeiro, Rio de Janeiro, 210360-040, Brazil.
Moyra Machado PortilhoInstituto de Pesquisas Gonçalo Moniz, FIOCRUZ, Salvador, Bahia, Brazil.
Jakeline Ribeiro BarbosaLaboratorio de Hepatites Virais, Instituto Oswaldo Cruz, Helio and Peggy Pereira Pavillion - Ground Floor - Room B09, Fundação Oswaldo Cruz, FIOCRUZ, Av. Brasil, 4365 - Manguinhos, Rio de Janeiro, Rio de Janeiro, 210360-040, Brazil.
Carolina Pimentel de AzevedoLaboratorio de Hepatites Virais, Instituto Oswaldo Cruz, Helio and Peggy Pereira Pavillion - Ground Floor - Room B09, Fundação Oswaldo Cruz, FIOCRUZ, Av. Brasil, 4365 - Manguinhos, Rio de Janeiro, Rio de Janeiro, 210360-040, Brazil.
Ana Carolina da Fonseca MendonçaLaboratorio de Hepatites Virais, Instituto Oswaldo Cruz, Helio and Peggy Pereira Pavillion - Ground Floor - Room B09, Fundação Oswaldo Cruz, FIOCRUZ, Av. Brasil, 4365 - Manguinhos, Rio de Janeiro, Rio de Janeiro, 210360-040, Brazil.
José Napoleão Monte da CruzLaboratório Central Do Estado Do Ceará, Fortaleza, Ceará, Brazil.
Cristiane Cunha FrotaDepartamento de Patologia E Medicina Legal, Faculdade de Medicina, Universidade Federal Do Ceará, Fortaleza, Ceará, Brazil.
Bárbara Vieira do LagoLaboratorio de Hepatites Virais, Instituto Oswaldo Cruz, Helio and Peggy Pereira Pavillion - Ground Floor - Room B09, Fundação Oswaldo Cruz, FIOCRUZ, Av. Brasil, 4365 - Manguinhos, Rio de Janeiro, Rio de Janeiro, 210360-040, Brazil. barbaravlago@gmail.com.
Lívia Melo VillarLaboratorio de Hepatites Virais, Instituto Oswaldo Cruz, Helio and Peggy Pereira Pavillion - Ground Floor - Room B09, Fundação Oswaldo Cruz, FIOCRUZ, Av. Brasil, 4365 - Manguinhos, Rio de Janeiro, Rio de Janeiro, 210360-040, Brazil. lvillar@ioc.fiocruz.br.
Fundação Oswaldo Cruz · BRInstituto Federal de Educação, Ciência e Tecnologia do Ceará · BRUniversidade Estadual do Ceará · BRUniversidade Federal do Ceará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis B virus (HBV) diagnosis is performed on serum samples, but the access to this diagnosis is difficult in low-income regions. The use of dried blood spot (DBS) samples does not require special structure for collection, storage or transport. This study evaluates the use of DBS for detection, quantification and sequencing of HBV DNA using in-house techniques. Two study groups were included: 92 HBsAg + individuals and 49 negative controls. Serum and DBS samples were submitted to quantitative and qualitative in-house PCR for S/pol genes, sequencing and phylogenetic analyses. Total of 84 serum samples were successfully amplified. Of them, 63 paired DBS were also positive in qualitative PCR. Qualitative PCR in DBS presented a sensitivity of 75% and specificity of 100% (Kappa = 0.689). Quantitative PCR in DBS presented a detection limit of 852.5 copies/mL (250 IU/mL), sensitivity of 77.63% and specificity of 100% (Kappa = 0.731). A total of 63 serum samples and 36 DBS samples were submitted to sequencing, revealing the circulation of genotypes A (65.08%), D (4.8%), E (3.2%) and F (27%) with 100% of correspondence between serum and DBS. All sequenced samples displayed polymorphisms in HBsAg gene. An HIV-coinfected patient presented the rtM204V/I-rtL180M double resistance mutation in serum and DBS. In conclusion, DBS is an alternative to detect, quantify and characterize HBV DNA, being a possibility of increasing diagnosis in low-income settings, closing gaps in HBV control.

Indexed as

DNA Mutational AnalysisDried Blood Spot TestingMutationAdultCase-Control StudiesCoinfectionDNA, ViralDrug Resistance, ViralFemaleHepatitis BHepatitis B virusHumansLimit of DetectionMaleMiddle AgedPhylogenyDNA, Viral

Identifiers

PMID35102169
PMCPMC8803841
OpenAlexW4210304505

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.