Evidence map›Paper›PMID 35101918›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals.

Linda Wegley Kelly, Craig E Nelson, Daniel Petras, Irina Koester, Zachary A Quinlan, Milou G I Arts, Louis-Felix Nothias, Jacqueline Comstock, Brandie M White, Ellen C Hopmans and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 84 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Linda Wegley KellyScripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92037; lwegley@ucsd.edu andreas.florian.haas@gmail.com.ORCID 0000-0002-9157-4426
Craig E NelsonDaniel K. Inouye Center for Microbial Oceanography, School of Ocean and Earth Science and Technology, University of Hawai'i at Mānoa, Honolulu, HI 96822.ORCID 0000-0003-2525-3496
Daniel PetrasCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA 92093.ORCID 0000-0002-6561-3022
Irina KoesterScripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92037.
Zachary A QuinlanScripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92037.ORCID 0000-0002-0351-8927
Milou G I ArtsDepartment of Microbiology & Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Texel, The Netherlands.ORCID 0000-0002-7245-5034
Louis-Felix NothiasCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA 92093.
Jacqueline ComstockDepartment of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106.
Brandie M WhiteDepartment of Biology, San Diego State University, San Diego, CA 92182.ORCID 0000-0002-8632-8511
Ellen C HopmansDepartment of Microbiology & Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Texel, The Netherlands.
Fleur C van DuylDepartment of Microbiology & Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Texel, The Netherlands.ORCID 0000-0002-8410-4151
Craig A CarlsonDepartment of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106.ORCID 0000-0003-2591-5293
Lihini I AluwihareScripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92037.ORCID 0000-0001-5031-9464
Pieter C DorresteinCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA 92093.
Andreas F HaasDepartment of Microbiology & Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Texel, The Netherlands; lwegley@ucsd.edu andreas.florian.haas@gmail.com.ORCID 0000-0002-1150-8841
Royal Netherlands Institute for Sea Research · NLScripps Institution of Oceanography · USUniversity of California San Diego · USUniversity of California, Santa Barbara · USSan Diego State University · USUniversity of Hawaiʻi at Mānoa · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolites exuded by primary producers comprise a significant fraction of marine dissolved organic matter, a poorly characterized, heterogenous mixture that dictates microbial metabolism and biogeochemical cycling. We present a foundational untargeted molecular analysis of exudates released by coral reef primary producers using liquid chromatography-tandem mass spectrometry to examine compounds produced by two coral species and three types of algae (macroalgae, turfing microalgae, and crustose coralline algae [CCA]) from Mo'orea, French Polynesia. Of 10,568 distinct ion features recovered from reef and mesocosm waters, 1,667 were exuded by producers; the majority (86%) were organism specific, reflecting a clear divide between coral and algal exometabolomes. These data allowed us to examine two tenets of coral reef ecology at the molecular level. First, stoichiometric analyses show a significantly reduced nominal carbon oxidation state of algal exometabolites than coral exometabolites, illustrating one ecological mechanism by which algal phase shifts engender fundamental changes in the biogeochemistry of reef biomes. Second, coral and algal exometabolomes were differentially enriched in organic macronutrients, revealing a mechanism for reef nutrient-recycling. Coral exometabolomes were enriched in diverse sources of nitrogen and phosphorus, including tyrosine derivatives, oleoyl-taurines, and acyl carnitines. Exometabolites of CCA and turf algae were significantly enriched in nitrogen with distinct signals from polyketide macrolactams and alkaloids, respectively. Macroalgal exometabolomes were dominated by nonnitrogenous compounds, including diverse prenol lipids and steroids. This study provides molecular-level insights into biogeochemical cycling on coral reefs and illustrates how changing benthic cover on reefs influences reef water chemistry with implications for microbial metabolism.

Indexed as

AnimalsAnthozoaCarbonCoral ReefsDissolved Organic MatterEcosystemMarine BiologyMetabolomicsNitrogenNutrientsPhosphorusPolynesiaSeawaterSeaweedCarbonDissolved Organic MatterNitrogenNutrientsPhosphoruscoral reefsmetabolomicsmolecular networking

Identifiers

PMID35101918
PMCPMC8812564
OpenAlexW4210678111

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.