Evidence map›Paper›PMID 35101637›Full record

ArticleInternational journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases2022

Contact tracing period and epidemiological characteristics of an outbreak of the SARS-CoV-2 Delta variant in Guangzhou.

Xiaowei Ma, Keyi Wu, Yongguang Li, Shunming Li, Lan Cao, Huaping Xie, Jiazhen Zheng, Rui Zhou, Zelin Yuan, Zhiwei Huang and 2 more

Abstract read
In one paragraph

Article in International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Optimizing the detection of emerging infections using mobility-based spatial sampling.International journal of applied earth observation and geoinformation : ITC journal · 2024
    Article
  6. Review: The Landscape of Antiviral Therapy for COVID-19 in the Era of Widespread Population Immunity and Omicron-Lineage Viruses.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2024
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Xiaowei MaGuangzhou Center for Disease Control and Prevention, Guangzhou City, 510440, Guangdong, China.
Keyi WuDepartment of Epidemiology, School of Public Health, Southern Medical University (Guangdong Provincial Key Laboratory of Tropical Disease Research), Nos.1023-No.1063, Shatai South Road, Baiyun District, 510515, Guangzhou, China.
Yongguang LiGuangzhou Center for Disease Control and Prevention, Guangzhou City, 510440, Guangdong, China.
Shunming LiGuangzhou Center for Disease Control and Prevention, Guangzhou City, 510440, Guangdong, China.
Lan CaoGuangzhou Center for Disease Control and Prevention, Guangzhou City, 510440, Guangdong, China.
Huaping XieGuangzhou Center for Disease Control and Prevention, Guangzhou City, 510440, Guangdong, China.
Jiazhen ZhengDepartment of Epidemiology, School of Public Health, Southern Medical University (Guangdong Provincial Key Laboratory of Tropical Disease Research), Nos.1023-No.1063, Shatai South Road, Baiyun District, 510515, Guangzhou, China.
Rui ZhouDepartment of Epidemiology, School of Public Health, Southern Medical University (Guangdong Provincial Key Laboratory of Tropical Disease Research), Nos.1023-No.1063, Shatai South Road, Baiyun District, 510515, Guangzhou, China.
Zelin YuanDepartment of Epidemiology, School of Public Health, Southern Medical University (Guangdong Provincial Key Laboratory of Tropical Disease Research), Nos.1023-No.1063, Shatai South Road, Baiyun District, 510515, Guangzhou, China.
Zhiwei HuangDepartment of Epidemiology, School of Public Health, Southern Medical University (Guangdong Provincial Key Laboratory of Tropical Disease Research), Nos.1023-No.1063, Shatai South Road, Baiyun District, 510515, Guangzhou, China.
Jun YuanGuangzhou Center for Disease Control and Prevention, Guangzhou City, 510440, Guangdong, China. Electronic address: yuanjuncom@163.com.
Xianbo WuInstitute of Public Health, Guangzhou Medical University & Guangzhou Center for Disease Control and Prevention. Electronic address: wuxb1010@smu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesAn outbreak of the SARS-CoV-2 Delta variant occurred in Guangzhou in 2021. This study aimed to identify the transmission dynamics and epidemiological characteristics of the Delta variant outbreak to formulate an effective prevention strategy.

methodsA total of 13102 close contacts and 69 index cases were collected. The incubation period, serial interval, and time interval from the exposure of close contacts to the symptom onset of cases were estimated. Transmission risks based on the exposure time and various characteristics were also assessed.

resultsThe mean time from exposure to symptom onset among non-household presymptomatic transmission was 3.83 ± 2.29 days, the incubation period was 5 days, and the serial interval was 3 days. The secondary attack rate was high within 4 days before onset and 4-10 days after symptom onset. Compared with other contact types, household contact had a higher transmission risk. The transmission risk increased with the number and frequency of contact with index cases. Cycle threshold (Ct) values were associated with lower transmission risk (adjusted odds ratio [OR] 0.93 [95% CI 0.88-0.99] for ORF 1ab gene; adjusted OR 0.91 [95% CI 0.86-0.97] for N gene).

conclusionThe contact tracing period may need to be extended to 4 days before symptom onset. The low Ct value of index cases, the high number and frequency of contact with index cases, and household contacts were associated with a higher transmission risk of SARS-CoV-2 Delta.

Indexed as

COVID-19SARS-CoV-2Contact TracingDisease OutbreaksHumanscontact tracingCOVID-19Delta variantepidemiological characteristics

Identifiers

PMID35101637
PMCPMC8800156

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.