Evidence map›Paper›PMID 35101128›Full record

ArticleJournal of biomedical semantics2022

Text mining-based measurement of precision of polysomnographic reports as basis for intervention.

Florent Baty, Jemima Hegermann, Tiziana Locatelli, Claudio Rüegg, Christian Gysin, Frank Rassouli, Martin Brutsche

Abstract read
In one paragraph

Article in Journal of biomedical semantics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Florent BatyLung Center, Cantonal Hospital St. Gallen, Rorschacherstrasse 95, St. Gallen, 9007, Switzerland.ORCID 0000-0002-1425-0428
Jemima HegermannLung Center, Cantonal Hospital St. Gallen, Rorschacherstrasse 95, St. Gallen, 9007, Switzerland.
Tiziana LocatelliLung Center, Cantonal Hospital St. Gallen, Rorschacherstrasse 95, St. Gallen, 9007, Switzerland.
Claudio RüeggDivision of General Internal Medicine, Cantonal Hospital St. Gallen, Rorschacherstrasse 95, St. Gallen, 9007, Switzerland.
Christian GysinLung Center, Cantonal Hospital St. Gallen, Rorschacherstrasse 95, St. Gallen, 9007, Switzerland.
Frank RassouliLung Center, Cantonal Hospital St. Gallen, Rorschacherstrasse 95, St. Gallen, 9007, Switzerland.
Martin BrutscheLung Center, Cantonal Hospital St. Gallen, Rorschacherstrasse 95, St. Gallen, 9007, Switzerland. martin.brutsche@kssg.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundText mining can be applied to automate knowledge extraction from unstructured data included in medical reports and generate quality indicators applicable for medical documentation. The primary objective of this study was to apply text mining methodology for the analysis of polysomnographic medical reports in order to quantify sources of variation - here the diagnostic precision vs. the inter-rater variability - in the work-up of sleep-disordered breathing. The secondary objective was to assess the impact of a text block standardization on the diagnostic precision of polysomnography reports in an independent test set.

resultsPolysomnography reports of 243 laboratory-based overnight sleep investigations scored by 9 trained sleep specialists of the Sleep Center St. Gallen were analyzed using a text-mining methodology. Patterns in the usage of discriminating terms allowed for the characterization of type and severity of disease and inter-rater homogeneity. The variation introduced by the inter-rater (technician/physician) heterogeneity was found to be twice as high compared to the variation introduced by effective diagnostic information. A simple text block standardization could significantly reduce the inter-rater variability by 44%, enhance the predictive value and ultimately improve the diagnostic accuracy of polysomnography reports.

conclusionsText mining was successfully used to assess and optimize the quality, as well as the precision and homogeneity of medical reporting of diagnostic procedures - here exemplified with sleep studies. Text mining methodology could lay the ground for objective and systematic qualitative assessment of medical reports.

Indexed as

Data MiningResearch ReportElectronic medical reportsPolysomnographyText mining

Identifiers

PMID35101128
PMCPMC8805265

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.