Evidence map›Paper›PMID 35100997›Full record

ArticleBMC infectious diseases2022

Development of a new serotyping ELISA for Toxoplasma gondii type II, type III and Africa 1 lineages using in silico peptide discovery methods, well categorized feline and human outbreak serum samples.

Hüseyin Can, Ayşegül Aksoy Gökmen, Mert Döşkaya, Sedef Erkunt Alak, Aysu Değirmenci Döşkaya, Muhammet Karakavuk, Ahmet Efe Köseoğlu, Tuğba Karakavuk, Ceren Gül, Mervenur Güvendi and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Serological diagnosis of toxoplasmosis in pregnancy: comparison between a manual commercial ELISA assay and the automated VIDASEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2023
    Article
  4. Serotyping, a challenging approach forFrontiers in medicine · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Hüseyin CanMolecular Biology Section, Department of Biology, Faculty of Science, Ege University, İzmir, Turkey. huseyin.can@ege.edu.tr.
Ayşegül Aksoy GökmenDepartment of Microbiology, Faculty of Medicine, İzmir Katip Çelebi University, İzmir, Turkey.
Mert DöşkayaVaccine Development, Application and Research Center, Ege University, İzmir, Turkey.
Sedef Erkunt AlakMolecular Biology Section, Department of Biology, Faculty of Science, Ege University, İzmir, Turkey.
Aysu Değirmenci DöşkayaVaccine Development, Application and Research Center, Ege University, İzmir, Turkey.
Muhammet KarakavukVaccine Development, Application and Research Center, Ege University, İzmir, Turkey.
Ahmet Efe KöseoğluMolecular Biology Section, Department of Biology, Faculty of Science, Ege University, İzmir, Turkey.
Tuğba KarakavukGraduate Faculty of Natural and Applied Science Biotechnology Program, Ege University, İzmir, Turkey.
Ceren GülGraduate Faculty of Natural and Applied Science Biotechnology Program, Ege University, İzmir, Turkey.
Mervenur GüvendiMolecular Biology Section, Department of Biology, Faculty of Science, Ege University, İzmir, Turkey.
Aytül GülDepartment of Bioengineering, Faculty of Engineering, Ege University, İzmir, Turkey.
Adnan Yüksel GürüzVaccine Development, Application and Research Center, Ege University, İzmir, Turkey.
Selçuk KayaDepartment of Microbiology, Faculty of Medicine, İzmir Katip Çelebi University, İzmir, Turkey.
Aurélien MercierCentre National de Référence (CNR) Toxoplasmose/Toxoplasma Biological Resource Center (BRC), Centre Hospitalier-Universitaire Dupuytren, Limoges, France.
Cemal ÜnMolecular Biology Section, Department of Biology, Faculty of Science, Ege University, İzmir, Turkey.
Ege University · TRIzmir Kâtip Çelebi University · TR

Funding

İzmir Katip Çelebi Scientific Research Projects Coordination Unit 2018-ÖNAP-TIPF-0006
6 · The paper itself

Abstract

backgroundDiscovery of new Toxoplasma gondii serotyping epitopes is important due to reports showing the influence of genotype on the severity of toxoplasmosis. In Turkey, genotypes belonging to type II, type III and Africa 1 lineages were mainly detected. The present study focused on to find out epitopes with high discriminative capacity to serotype these genotypes using well characterized strains isolated from Turkey.

methodsTo meet this objective, GRA6 and GRA7 genes were sequenced from strains belonging to the type II, III and Africa 1 lineages, and B cell epitopes inside these sequences were predicted by Bcepred and additional docking analysis was performed with B cell receptor. Based on these analyses, 22 peptides harboring lineage specific epitopes were synthesized. Then, the serotyping potency of these peptides was tested using peptide ELISA and well categorized serum samples collected from stray cats infected with genotypes of the different lineages type II (n:9), III (n:1) and Africa 1 (n:1). As a result of peptide-ELISA, a serotyping schema was constructed with peptides that show high discriminative capacity and this assay was validated by sera collected from humans after an outbreak (n:30) and mother/newborn pair sera (n:3). Later, the validated serotyping schema was used to serotype a larger group of human (n:38) and cat (n:24) sera.

resultsAmong 22 peptides, GRA6II/c, GRA7III/d, and GRA6 Africa 1/b epitopes have shown discriminative capacity. During the validation of peptide-ELISA, the serotype of toxoplasmosis outbreak and mother/newborn cases were detected to be serotype II. Moreover, the analyses in a larger group showed that serotype II was prevalent in humans and stray cats.

conclusionsOverall, the results showed that the serotyping schema could be successfully used to serotype T. gondii infections caused by type II, III and Africa 1 genotype.

Indexed as

ToxoplasmaAnimalsAntigens, ProtozoanCatsDisease OutbreaksEnzyme-Linked Immunosorbent AssayHumansPeptidesSerotypingAntigens, ProtozoanPeptidesGenotypingGRA6GRA7Peptide ELISASerotypingToxoplasmosis

Identifiers

PMID35100997
PMCPMC8802539
OpenAlexW4210368440

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.